PDB entry 3bku

View 3bku on RCSB PDB site
Description: Apo C-terminal Domain of NikR
Class: metal binding protein
Keywords: NikR, nickel regulatory protein, transcription factor, beta sandwich, DNA-binding, Metal-binding, Repressor, Transcription regulation, METAL BINDING PROTEIN
Deposited on 2007-12-07, released 2008-02-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Nickel-responsive regulator
    Species: Escherichia coli [TaxId:562]
    Gene: nikR, yhhG
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bkua_
  • Chain 'B':
    Compound: Nickel-responsive regulator
    Species: Escherichia coli [TaxId:562]
    Gene: nikR, yhhG
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bkub_
  • Chain 'C':
    Compound: Nickel-responsive regulator
    Species: Escherichia coli [TaxId:562]
    Gene: nikR, yhhG
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bkuc_
  • Chain 'D':
    Compound: Nickel-responsive regulator
    Species: Escherichia coli [TaxId:562]
    Gene: nikR, yhhG
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bkud_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3bkuA (A:)
hgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgd
vqhfaddviaqrgvrhghlqclpked

    Sequence, based on observed residues (ATOM records): (download) 
    >3bkuA (A:)
qgfavlsyvyehekrhdlsvatlhvhinhddcleiavlkgdmgdvqhfaddviaqrgvrh
ghlqclpk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3bkuB (B:)
hgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgd
vqhfaddviaqrgvrhghlqclpked

    Sequence, based on observed residues (ATOM records): (download) 
    >3bkuB (B:)
gtqgfavlsyvyehrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgdvqh
faddviaqrgvrhghlqclpke

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3bkuC (C:)
hgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgd
vqhfaddviaqrgvrhghlqclpked

    Sequence, based on observed residues (ATOM records): (download) 
    >3bkuC (C:)
qgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgdvqh
faddviaqrgvrhghlqclpked

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3bkuD (D:)
hgtqgfavlsyvyehekrdlasrivstqhhhhdlsvatlhvhinhddcleiavlkgdmgd
vqhfaddviaqrgvrhghlqclpked

    Sequence, based on observed residues (ATOM records): (download) 
    >3bkuD (D:)
tqgfavlsyvyehedlsvatlhvhinhddcleiavlkgdmgdvqhfaddviaqrgvrhgh
lqclpk