PDB entry 3bkc
View 3bkc on RCSB PDB site
Description: Crystal structure of anti-amyloid beta FAB WO2 (P21, FormB)
Class: immune system
Keywords: Abeta, amyloid beta peptide, Fab, WO2, alzheimer's disease, immunotherapies, APP, IMMUNE SYSTEM
Deposited on
2007-12-06, released
2008-04-15
The last revision prior to the SCOPe 2.03 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.182
AEROSPACI score: 0.47
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: WO2 IgG2a Fab fragment Heavy Chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3bkch1 - Chain 'L':
Compound: WO2 IgG2a Fab fragment Light Chain Kappa
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3bkcl1, d3bkcl2 - Heterogens: NA, HOH
PDB Chain Sequences:
- Chain 'H':
Sequence, based on SEQRES records: (download)
>3bkcH (H:)
evtlkesgpgllkpsqtlsltcsfsgfsirtskvgvswirqpsgkglewlahiywdddkr
ynpslesrltiskdtsrdmvfmkitsvdtadtatyycarrgfygrkyevnhfdywgqgtt
ltvssakttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpa
vlqsdlytlsssvtvtsstwpsesitcnvahpasstkvdkkivprdcg
Sequence, based on observed residues (ATOM records): (download)
>3bkcH (H:)
vtlkesgpgllkpsqtlsltcsfsgfsirtskvgvswirqpsgkglewlahiywdddkry
npslesrltiskdtsrdmvfmkitsvdtadtatyycarrgfygrkyevnhfdywgqgttl
tvssakttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpav
lqsdlytlsssvtvtsstwpsesitcnvahpasstkvdkkivpr
- Chain 'L':
Sequence, based on SEQRES records: (download)
>3bkcL (L:)
dqspqavssgcllkmklpvrllvlmfwipgsssdvlmtqtplslpvnlgeqasiscrssq
sivhsnghtylewylqrpgqspklliyqvstrfsgvpdrfsgsgsgtdftlrisrveaed
lgvyycfqaslvpltfgagtklelkradaaptvsifppsseqltsggasvvcflnnfypk
dinvkwkidgserqngvlnswtdqdskdstysmsstltltkdeyerhnsytceathktst
spivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>3bkcL (L:)
dvlmtqtplslpvnlgeqasiscrssqsivhsnghtylewylqrpgqspklliyqvstrf
sgvpdrfsgsgsgtdftlrisrveaedlgvyycfqaslvpltfgagtklelkradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysm
sstltltkdeyerhnsytceathktstspivksfnrne