PDB entry 3bio

View 3bio on RCSB PDB site
Description: Crystal structure of oxidoreductase (Gfo/Idh/MocA family member) from Porphyromonas gingivalis W83
Deposited on 2007-11-30, released 2007-12-25
The last revision was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.158
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Oxidoreductase, Gfo/Idh/MocA family
    Species: Porphyromonas gingivalis [TaxId:242619]
    Gene: PG_0806
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Oxidoreductase, Gfo/Idh/MocA family
    Species: Porphyromonas gingivalis [TaxId:242619]
    Gene: PG_0806
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ACT, EPE, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3bioA (A:)
snamtddkkiraaivgygnigryalqalreapdfeiagivrrnpaevpfelqpfrvvsdi
eqlesvdvalvcspsrevertaleilkkgictadsfdihdgilalrrslgdaagksgaaa
viasgwdpgsdsvvrtlmqaivpkgitytnfgpgmsmghtvavkaidgvkaalsmtiplg
tgvhrrmvyvellpghnleevsaaikadeyfvhdethviqvdevdalidmghgvrmvrkg
vsgstqnqrmsfdmeinnpaltgqvlvcaaraamrqqpgaytlqeipvidllpgdreqwi
gklc

    Sequence, based on observed residues (ATOM records):
    >3bioA (A:)
kkiraaivgygnigryalqalreapdfeiagivrrelqpfrvvsdieqlesvdvalvcsp
srevertaleilkkgictadsfdihdgilalrrslgdaagksgaaaviasgwdpgsdsvv
rtlmqaivpkgitytnfgpgmsmghtvavkaidgvkaalsmtiplgtgvhrrmvyvellp
ghnleevsaaikadeyfvhdethviqvdevdalidmghgvrmvrkgvsgstqnqrmsfdm
einnpaltgqvlvcaaraamrqqpgaytlqeipvidllpgdreqwigklc

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3bioB (B:)
snamtddkkiraaivgygnigryalqalreapdfeiagivrrnpaevpfelqpfrvvsdi
eqlesvdvalvcspsrevertaleilkkgictadsfdihdgilalrrslgdaagksgaaa
viasgwdpgsdsvvrtlmqaivpkgitytnfgpgmsmghtvavkaidgvkaalsmtiplg
tgvhrrmvyvellpghnleevsaaikadeyfvhdethviqvdevdalidmghgvrmvrkg
vsgstqnqrmsfdmeinnpaltgqvlvcaaraamrqqpgaytlqeipvidllpgdreqwi
gklc

    Sequence, based on observed residues (ATOM records):
    >3bioB (B:)
kkiraaivgygnigryalqalreapdfeiagivrrnpaqpfrvvsdieqlesvdvalvcs
psrevertaleilkkgictadsfdihdgilalrrslgdaagksgaaaviasgwdpgsdsv
vrtlmqaivpkgitytnfgpgmsmghtvavkaidgvkaalsmtiplgtgvhrrmvyvell
pghnleevsaaikadeyfvhdethviqvdevdalidmghgvrmvrkgvsgstqnqrmsfd
meinnpaltgqvlvcaaraamrqqpgaytlqeipvidllpgdreqwigklc