PDB entry 3bid

View 3bid on RCSB PDB site
Description: Crystal structure of the NMB1088 protein from Neisseria meningitidis. Northeast Structural Genomics Consortium target MR91
Class: structural genomics, unknown function
Keywords: alpha-beta protein, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Deposited on 2007-11-30, released 2007-12-18
The last revision prior to the SCOP 1.75 freeze date was dated 2007-12-18, with a file datestamp of 2007-12-14.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.241
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: UPF0339 protein NMB1088
    Species: Neisseria meningitidis MC58
    Gene: NMB1088, 903505
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7DDI1 (0-55)
      • expression tag (56-57)
    Domains in SCOP 1.75: d3bida1
  • Chain 'B':
    Compound: UPF0339 protein NMB1088
    Species: Neisseria meningitidis MC58
    Gene: NMB1088, 903505
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7DDI1 (0-55)
      • expression tag (56)
    Domains in SCOP 1.75: d3bidb1
  • Chain 'C':
    Compound: UPF0339 protein NMB1088
    Species: Neisseria meningitidis MC58
    Gene: NMB1088, 903505
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7DDI1 (0-55)
      • expression tag (56-57)
    Domains in SCOP 1.75: d3bidc1
  • Chain 'D':
    Compound: UPF0339 protein NMB1088
    Species: Neisseria meningitidis MC58
    Gene: NMB1088, 903505
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7DDI1 (0-55)
      • expression tag (56)
    Domains in SCOP 1.75: d3bidd1
  • Chain 'E':
    Compound: UPF0339 protein NMB1088
    Species: Neisseria meningitidis MC58
    Gene: NMB1088, 903505
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7DDI1 (0-55)
      • expression tag (56-60)
    Domains in SCOP 1.75: d3bide1
  • Chain 'F':
    Compound: UPF0339 protein NMB1088
    Species: Neisseria meningitidis MC58
    Gene: NMB1088, 903505
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7DDI1 (0-55)
      • expression tag (56-57)
    Domains in SCOP 1.75: d3bidf1
  • Chain 'G':
    Compound: UPF0339 protein NMB1088
    Species: Neisseria meningitidis MC58
    Gene: NMB1088, 903505
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7DDI1 (0-55)
      • expression tag (56-59)
    Domains in SCOP 1.75: d3bidg1
  • Chain 'H':
    Compound: UPF0339 protein NMB1088
    Species: Neisseria meningitidis MC58
    Gene: NMB1088, 903505
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7DDI1 (0-55)
      • expression tag (56)
    Domains in SCOP 1.75: d3bidh1
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3bidA (A:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevlehh
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    Sequence, based on observed residues (ATOM records): (download) 
    >3bidA (A:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevle

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3bidB (B:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevlehh
hhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3bidB (B:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3bidC (C:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevlehh
hhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3bidC (C:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevle

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3bidD (D:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevlehh
hhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3bidD (D:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3bidE (E:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevlehh
hhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3bidE (E:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevlehh
h

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3bidF (F:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevlehh
hhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3bidF (F:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevle

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >3bidG (G:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevlehh
hhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3bidG (G:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevlehh

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3bidH (H:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevlehh
hhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3bidH (H:)
myfeiykdakgeyrwrlkaanheiiaqgegytskqncqhavdllksttaatpvkevl