PDB entry 3beb

View 3beb on RCSB PDB site
Description: Crystal structure of E. coli penicillin-binding protein 5 in complex with a peptide-mimetic penicillin
Class: hydrolase
Keywords: PEPTIDOGLYCAN SYNTHESIS, PENICILLIN-BINDING PROTEIN, DD-CARBOXYPEPTIDASE, HYDROLASE, DESIGNED PENICILLIN, Cell shape, Cell wall biogenesis/degradation, Inner membrane, Membrane, Protease
Deposited on 2007-11-16, released 2008-08-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.238
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: penicillin-binding protein 5
    Species: ESCHERICHIA COLI
    Gene: dacA, pfv
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3beba1, d3beba2
  • Heterogens: HJ3, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3bebA (A:)
ddlniktmipgvpqidaesyilidynsgkvlaeqnadvrrdpasltkmmtsyvigqamka
gkfketdlvtigndawatgnpvfkgsslmflkpgmqvpvsqlirginlqsgndacvamad
faagsqdafvglmnsyvnalglknthfqtvhgldadgqyssardmaligqalirdvpney
siykekeftfngirqlnrngllwdnslnvdgiktghtdkagynlvasategqmrlisavm
ggrtfkgreaeskklltwgfrffetvnplkvgkefasepvwfgdsdraslgvdkdvylti
prgrmkdlkasyvlnsselhaplqknqvvgtinfqldgktieqrplvvlqeipegnfgdp
vid

    Sequence, based on observed residues (ATOM records): (download) 
    >3bebA (A:)
niktmipgvpqidaesyilidynsgkvlaeqnadvrrdpasltkmmtsyvigqamkagkf
ketdlvtigndawatgnpvfkgsslmflkpgmqvpvsqlirginlqsgndacvamadfaa
gsqdafvglmnsyvnalglknthfqtvhgldadgqyssardmaligqalirdvpneysiy
kekeftfngirqlnrngllwdnslnvdgiktghtdkagynlvasategqmrlisavmggr
tfkgreaeskklltwgfrffetvnplkvgkefasepvwfgdsdraslgvdkdvyltiprg
rmkdlkasyvlnsselhaplqknqvvgtinfqldgktieqrplvvlqeipegnf