PDB entry 3b93
View 3b93 on RCSB PDB site
Description: crystal structure of human GITRL
Class: cytokine
Keywords: open trimer, asymmetric, C2 spacegroup, Cytokine, Glycoprotein, Membrane, Signal-anchor, Transmembrane
Deposited on
2007-11-02, released
2008-02-12
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.209
AEROSPACI score: 0.33
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Tumor necrosis factor ligand superfamily member 18
Species: Homo sapiens [TaxId:9606]
Gene: TNFSF18, AITRL, GITRL, TL6
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3b93a1 - Chain 'B':
Compound: Tumor necrosis factor ligand superfamily member 18
Species: Homo sapiens [TaxId:9606]
Gene: TNFSF18, AITRL, GITRL, TL6
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3b93b_ - Chain 'C':
Compound: Tumor necrosis factor ligand superfamily member 18
Species: Homo sapiens [TaxId:9606]
Gene: TNFSF18, AITRL, GITRL, TL6
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3b93c_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3b93A (A:)
gamasqletakepcmakfgplpskwqmasseppcvnkvsdwkleilqnglyliygqvapn
anyndvapfevrlyknkdmiqtltnkskiqnvggtyelhvgdtidlifnsehqvlknnty
wgiillanpqfis
Sequence, based on observed residues (ATOM records): (download)
>3b93A (A:)
kepcmakfgplpskwqmasseppcvnkvsdwkleilqnglyliygqvapnanyndvapfe
vrlyknkdmiqtltnkskiqnvggtyelhvgdtidlifnsehqvlknntywgiillanpq
fis
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3b93B (B:)
gamasqletakepcmakfgplpskwqmasseppcvnkvsdwkleilqnglyliygqvapn
anyndvapfevrlyknkdmiqtltnkskiqnvggtyelhvgdtidlifnsehqvlknnty
wgiillanpqfis
Sequence, based on observed residues (ATOM records): (download)
>3b93B (B:)
pcmakfgplpskwqmappcvnkvsdwkleilqnglyliygqvapvrlyknkdmiqtltki
qnvggtyelhvgdtidlifnsehnntywgiillanpqfis
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3b93C (C:)
gamasqletakepcmakfgplpskwqmasseppcvnkvsdwkleilqnglyliygqvapn
anyndvapfevrlyknkdmiqtltnkskiqnvggtyelhvgdtidlifnsehqvlknnty
wgiillanpqfis
Sequence, based on observed residues (ATOM records): (download)
>3b93C (C:)
pcmakfgplpskwqmasseppcvnkvsdwkleilqnglyliygqvapvrlyknkdmiqtl
tskiqnvggtyelhvgdtidlitywgiillanpqfi