PDB entry 3b8l

View 3b8l on RCSB PDB site
Description: crystal structure of a putative aromatic ring hydroxylase (saro_3538) from novosphingobium aromaticivorans dsm at 1.75 a resolution
Class: oxidoreductase
Keywords: putative aromatic ring hydroxylase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, oxidoreductase
Deposited on 2007-11-01, released 2007-11-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uncharacterized protein
    Species: Novosphingobium aromaticivorans [TaxId:279238]
    Gene: YP_001165924.1, Saro_3538
    Database cross-references and differences (RAF-indexed):
    • Uniprot A4XEN7 (19-162)
      • leader sequence (16-18)
    Domains in SCOPe 2.08: d3b8la1, d3b8la2
  • Chain 'B':
    Compound: Uncharacterized protein
    Species: Novosphingobium aromaticivorans [TaxId:279238]
    Gene: YP_001165924.1, Saro_3538
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3b8lb_
  • Chain 'C':
    Compound: Uncharacterized protein
    Species: Novosphingobium aromaticivorans [TaxId:279238]
    Gene: YP_001165924.1, Saro_3538
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3b8lc_
  • Chain 'D':
    Compound: Uncharacterized protein
    Species: Novosphingobium aromaticivorans [TaxId:279238]
    Gene: YP_001165924.1, Saro_3538
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3b8ld_
  • Chain 'E':
    Compound: Uncharacterized protein
    Species: Novosphingobium aromaticivorans [TaxId:279238]
    Gene: YP_001165924.1, Saro_3538
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3b8le_
  • Chain 'F':
    Compound: Uncharacterized protein
    Species: Novosphingobium aromaticivorans [TaxId:279238]
    Gene: YP_001165924.1, Saro_3538
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3b8lf_
  • Heterogens: GOL, PEG, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3b8lA (A:)
mgsdkihhhhhhenlyfqgmqcpiedrlaiqdlmiayahavdtvsdidavldvftedavf
dlsgigltpqvghagirefftnvfanmshhahyltnfavtgyegdtasmrayvigmgvgk
dgravtvngryffevrrtekgwkatrytmdflmplsgtldnak

    Sequence, based on observed residues (ATOM records): (download) 
    >3b8lA (A:)
fqgmqcpiedrlaiqdlmiayahavdtvsdidavldvftedavfdlsgigltpqvghagi
refftnvfanmshhahyltnfavtgyegdtasmrayvigmgvgkdgravtvngryffevr
rtekgwkatrytmdflmplsgtldnak

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3b8lB (B:)
mgsdkihhhhhhenlyfqgmqcpiedrlaiqdlmiayahavdtvsdidavldvftedavf
dlsgigltpqvghagirefftnvfanmshhahyltnfavtgyegdtasmrayvigmgvgk
dgravtvngryffevrrtekgwkatrytmdflmplsgtldnak

    Sequence, based on observed residues (ATOM records): (download) 
    >3b8lB (B:)
mqcpiedrlaiqdlmiayahavdtvsdidavldvftedavfdlsgigltpqvghagiref
ftnvfanmshhahyltnfavtgyegdtasmrayvigmgvgkdgravtvngryffevrrte
kgwkatrytmdflmplsgtldnak

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3b8lC (C:)
mgsdkihhhhhhenlyfqgmqcpiedrlaiqdlmiayahavdtvsdidavldvftedavf
dlsgigltpqvghagirefftnvfanmshhahyltnfavtgyegdtasmrayvigmgvgk
dgravtvngryffevrrtekgwkatrytmdflmplsgtldnak

    Sequence, based on observed residues (ATOM records): (download) 
    >3b8lC (C:)
mqcpiedrlaiqdlmiayahavdtvsdidavldvftedavfdlsgigltpqvghagiref
ftnvfanmshhahyltnfavtgyegdtasmrayvigmgvgkdgravtvngryffevrrte
kgwkatrytmdflmplsgtldnak

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3b8lD (D:)
mgsdkihhhhhhenlyfqgmqcpiedrlaiqdlmiayahavdtvsdidavldvftedavf
dlsgigltpqvghagirefftnvfanmshhahyltnfavtgyegdtasmrayvigmgvgk
dgravtvngryffevrrtekgwkatrytmdflmplsgtldnak

    Sequence, based on observed residues (ATOM records): (download) 
    >3b8lD (D:)
mqcpiedrlaiqdlmiayahavdtvsdidavldvftedavfdlsgigltpqvghagiref
ftnvfanmshhahyltnfavtgyegdtasmrayvigmgvgkdgravtvngryffevrrte
kgwkatrytmdflmplsgtldnak

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3b8lE (E:)
mgsdkihhhhhhenlyfqgmqcpiedrlaiqdlmiayahavdtvsdidavldvftedavf
dlsgigltpqvghagirefftnvfanmshhahyltnfavtgyegdtasmrayvigmgvgk
dgravtvngryffevrrtekgwkatrytmdflmplsgtldnak

    Sequence, based on observed residues (ATOM records): (download) 
    >3b8lE (E:)
mqcpiedrlaiqdlmiayahavdtvsdidavldvftedavfdlsgigltpqvghagiref
ftnvfanmshhahyltnfavtgyegdtasmrayvigmgvgkdgravtvngryffevrrte
kgwkatrytmdflmplsgtldnak

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3b8lF (F:)
mgsdkihhhhhhenlyfqgmqcpiedrlaiqdlmiayahavdtvsdidavldvftedavf
dlsgigltpqvghagirefftnvfanmshhahyltnfavtgyegdtasmrayvigmgvgk
dgravtvngryffevrrtekgwkatrytmdflmplsgtldnak

    Sequence, based on observed residues (ATOM records): (download) 
    >3b8lF (F:)
qcpiedrlaiqdlmiayahavdtvsdidavldvftedavfdlsgigltpqvghagireff
tnvfanmshhahyltnfavtgyegdtasmrayvigmgvgkdgravtvngryffevrrtek
gwkatrytmdflmplsgtldnak