PDB entry 3b8i

View 3b8i on RCSB PDB site
Description: crystal structure of oxaloacetate decarboxylase from pseudomonas aeruginosa (pa4872) in complex with oxalate and mg2+.
Deposited on 2007-11-01, released 2008-01-01
The last revision was dated 2018-01-24, with a file datestamp of 2018-01-19.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PA4872 oxaloacetate decarboxylase
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: Dnase1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: PA4872 oxaloacetate decarboxylase
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: Dnase1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: PA4872 oxaloacetate decarboxylase
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: Dnase1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: PA4872 oxaloacetate decarboxylase
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: Dnase1
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: PA4872 oxaloacetate decarboxylase
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: Dnase1
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: PA4872 oxaloacetate decarboxylase
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: Dnase1
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MG, OXL, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3b8iA (A:)
mhrashhelramfralldssrcyhtasvfdpmsariaadlgfecgilggsvaslqvlaap
dfalitlsefveqatrigrvarlpviadadhgygnalnvmrtvveleragiaaltiedtl
lpaqfgrkstdlicveegvgkiraalearvdpaltiiartnaelidvdaviqrtlayqea
gadgiclvgvrdfahleaiaehlhiplmlvtygnpqlrddarlarlgvrvvvnghaayfa
aikatydclreergavasdltaselskkytfpeeyqawardymevke

    Sequence, based on observed residues (ATOM records):
    >3b8iA (A:)
rashhelramfralldssrcyhtasvfdpmsariaadlgfecgilggsvaslqvlaapdf
alitlsefveqatrigrvarlpviadadhgygnalnvmrtvveleragiaaltiedtllp
aqfgrkstdlicveegvgkiraalearvdpaltiiartnaelidvdaviqrtlayqeaga
dgiclvgvrdfahleaiaehlhiplmlvtygnpqlrddarlarlgvrvvvnghaayfaai
katydclreergavasdltaselskkytfpeeyqawardymevk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3b8iB (B:)
mhrashhelramfralldssrcyhtasvfdpmsariaadlgfecgilggsvaslqvlaap
dfalitlsefveqatrigrvarlpviadadhgygnalnvmrtvveleragiaaltiedtl
lpaqfgrkstdlicveegvgkiraalearvdpaltiiartnaelidvdaviqrtlayqea
gadgiclvgvrdfahleaiaehlhiplmlvtygnpqlrddarlarlgvrvvvnghaayfa
aikatydclreergavasdltaselskkytfpeeyqawardymevke

    Sequence, based on observed residues (ATOM records):
    >3b8iB (B:)
rashhelramfralldssrcyhtasvfdpmsariaadlgfecgilggsvaslqvlaapdf
alitlsefveqatrigrvarlpviadadhgygnalnvmrtvveleragiaaltiedtllp
aqfgrkstdlicveegvgkiraalearvdpaltiiartnaelidvdaviqrtlayqeaga
dgiclvgvrdfahleaiaehlhiplmlvtygnpqlrddarlarlgvrvvvnghaayfaai
katydclreergavasdltaselskkytfpeeyqawardymev

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3b8iC (C:)
mhrashhelramfralldssrcyhtasvfdpmsariaadlgfecgilggsvaslqvlaap
dfalitlsefveqatrigrvarlpviadadhgygnalnvmrtvveleragiaaltiedtl
lpaqfgrkstdlicveegvgkiraalearvdpaltiiartnaelidvdaviqrtlayqea
gadgiclvgvrdfahleaiaehlhiplmlvtygnpqlrddarlarlgvrvvvnghaayfa
aikatydclreergavasdltaselskkytfpeeyqawardymevke

    Sequence, based on observed residues (ATOM records):
    >3b8iC (C:)
rashhelramfralldssrcyhtasvfdpmsariaadlgfecgilggsvaslqvlaapdf
alitlsefveqatrigrvarlpviadadhgygnalnvmrtvveleragiaaltiedtllp
aqfgrkstdlicveegvgkiraalearvdpaltiiartnaelidvdaviqrtlayqeaga
dgiclvgvrdfahleaiaehlhiplmlvtygnpqlrddarlarlgvrvvvnghaayfaai
katydclreergaltaselskkytfpeeyqawardyme

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3b8iD (D:)
mhrashhelramfralldssrcyhtasvfdpmsariaadlgfecgilggsvaslqvlaap
dfalitlsefveqatrigrvarlpviadadhgygnalnvmrtvveleragiaaltiedtl
lpaqfgrkstdlicveegvgkiraalearvdpaltiiartnaelidvdaviqrtlayqea
gadgiclvgvrdfahleaiaehlhiplmlvtygnpqlrddarlarlgvrvvvnghaayfa
aikatydclreergavasdltaselskkytfpeeyqawardymevke

    Sequence, based on observed residues (ATOM records):
    >3b8iD (D:)
rashhelramfralldssrcyhtasvfdpmsariaadlgfecgilggsvaslqvlaapdf
alitlsefveqatrigrvarlpviadadhgygnalnvmrtvveleragiaaltiedtllp
aqfrstdlicveegvgkiraalearvdpaltiiartnaelidvdaviqrtlayqeagadg
iclvgvrdfahleaiaehlhiplmlvtygnpqlrddarlarlgvrvvvnghaayfaaika
tydclreergavasdltaselskkytfpeeyqawardyme

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3b8iE (E:)
mhrashhelramfralldssrcyhtasvfdpmsariaadlgfecgilggsvaslqvlaap
dfalitlsefveqatrigrvarlpviadadhgygnalnvmrtvveleragiaaltiedtl
lpaqfgrkstdlicveegvgkiraalearvdpaltiiartnaelidvdaviqrtlayqea
gadgiclvgvrdfahleaiaehlhiplmlvtygnpqlrddarlarlgvrvvvnghaayfa
aikatydclreergavasdltaselskkytfpeeyqawardymevke

    Sequence, based on observed residues (ATOM records):
    >3b8iE (E:)
ashhelramfralldssrcyhtasvfdpmsariaadlgfecgilggsvaslqvlaapdfa
litlsefveqatrigrvarlpviadadhgygnalnvmrtvveleragiaaltiedtllpa
qfgrkstdlicveegvgkiraalearvdpaltiiartnaelidvdaviqrtlayqeagad
giclvgvrdfahleaiaehlhiplmlvtygnpqlrddarlarlgvrvvvnghaayfaaik
atydclreergavasdltaselskkytfpeeyqawardymevk

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3b8iF (F:)
mhrashhelramfralldssrcyhtasvfdpmsariaadlgfecgilggsvaslqvlaap
dfalitlsefveqatrigrvarlpviadadhgygnalnvmrtvveleragiaaltiedtl
lpaqfgrkstdlicveegvgkiraalearvdpaltiiartnaelidvdaviqrtlayqea
gadgiclvgvrdfahleaiaehlhiplmlvtygnpqlrddarlarlgvrvvvnghaayfa
aikatydclreergavasdltaselskkytfpeeyqawardymevke

    Sequence, based on observed residues (ATOM records):
    >3b8iF (F:)
rashhelramfralldssrcyhtasvfdpmsariaadlgfecgilggsvaslqvlaapdf
alitlsefveqatrigrvarlpviadadhgygnalnvmrtvveleragiaaltiedtllp
aqfgrkstdlicveegvgkiraalearvdpaltiiartnaelidvdaviqrtlayqeaga
dgiclvgvrdfahleaiaehlhiplmlvtygnpqlrddarlarlgvrvvvnghaayfaai
katydclreergavasdltaselskkytfpeeyqawardymevk