PDB entry 3b6s
View 3b6s on RCSB PDB site
Description: Crystal Structure of hla-b*2705 Complexed with the Citrullinated Vasoactive Intestinal Peptide Type 1 Receptor (vipr) Peptide (residues 400-408)
Class: immune system
Keywords: Immune sistem/complex, MHC (Major Histocompatibility Complex), HLA-B*2705, Glycoprotein, Host-virus interaction, Immune response, Membrane, MHC I, Polymorphism, Transmembrane, Ubl conjugation, Disease mutation, Glycation, Immunoglobulin domain, Pyrrolidone carboxylic acid, Secreted, IMMUNE SYSTEM
Deposited on
2007-10-29, released
2008-07-22
The last revision prior to the SCOP 1.75 freeze date was dated
2008-10-14, with a file datestamp of
2008-10-10.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.186
AEROSPACI score: 0.64
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: HLA class I histocompatibility antigen, B-27 alpha chain
Species: HOMO SAPIENS
Gene: HLA-B, HLAB
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d3b6sa1, d3b6sa2 - Chain 'B':
Compound: Beta-2-microglobulin
Species: HOMO SAPIENS
Gene: B2M
Database cross-references and differences (RAF-indexed):
- Uniprot P61769 (1-99)
- initiating methionine (0)
Domains in SCOP 1.75: d3b6sb1 - Chain 'C':
Compound: vasoactive intestinal polypeptide receptor 1
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3b6sA (A:)
gshsmryfhtsvsrpgrgeprfitvgyvddtlfvrfdsdaaspreeprapwieqegpeyw
dretqickakaqtdredlrtllryynqseagshtlqnmygcdvgpdgrllrgyhqdaydg
kdyialnedlsswtaadtaaqitqrkweaarvaeqlraylegecvewlrrylengketlq
radppkthvthhpisdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpagdrt
fqkwaavvvpsgeeqrytchvqheglpkpltlrwep
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>3b6sB (B:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
- Chain 'C':
No sequence available.