PDB entry 3b5y

View 3b5y on RCSB PDB site
Description: Crystal Structure of MsbA from Salmonella typhimurium with AMPPNP
Class: membrane protein
Keywords: ABC transporter, MsbA, lipid flippase, ATP-binding, Hydrolase, Inner membrane, Lipid transport, Membrane, Nucleotide-binding, Transmembrane, MEMBRANE PROTEIN
Deposited on 2007-10-26, released 2007-12-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 4.5 Å
R-factor: 0.295
AEROSPACI score: -0.02 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lipid A export ATP-binding/permease protein msbA
    Species: Salmonella typhimurium [TaxId:602]
    Gene: msbA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3b5ya1, d3b5ya2
  • Chain 'B':
    Compound: Lipid A export ATP-binding/permease protein msbA
    Species: Salmonella typhimurium [TaxId:602]
    Gene: msbA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3b5yb1, d3b5yb2
  • Chain 'C':
    Compound: Lipid A export ATP-binding/permease protein msbA
    Species: Salmonella typhimurium [TaxId:602]
    Gene: msbA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3b5yc1, d3b5yc2
  • Chain 'D':
    Compound: Lipid A export ATP-binding/permease protein msbA
    Species: Salmonella typhimurium [TaxId:602]
    Gene: msbA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3b5yd1, d3b5yd2
  • Heterogens: ANP

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3b5yA (A:)
mhndkdlstwqtfrrlwptiapfkaglivagialilnaasdtfmlsllkpllddgfgktd
rsvllwmplvviglmilrgitsyissyciswvsgkvvmtmrrrlfghmmgmpvaffdkqs
tgtllsritydseqvassssgalitvvregasiiglfimmfyyswqlsiilvvlapivsi
airvvskrfrsisknmqntmgqvttsaeqmlkghkevlifggqevetkrfdkvsnkmrlq
gmkmvsassisdpiiqliaslalafvlyaasfpsvmdsltagtitvvfssmialmrplks
ltnvnaqfqrgmaacqtlfaildseqekdegkrvidratgdlefrnvtftypgrevpalr
ninlkipagktvalvgrsgsgkstiaslitrfydideghilmdghdlreytlaslrnqva
lvsqnvhlfndtvanniayarteeysreqieeaarmayamdfinkmdngldtiigengvl
lsggqrqriaiarallrdspilildeatsaldteseraiqaaldelqknrtslviahrls
tieqadeivvvedgiivergthsellaqhgvyaqlhkmqfgq

    Sequence, based on observed residues (ATOM records): (download) 
    >3b5yA (A:)
wqtfrrlwptiapfkaglivagialilnaasdtfmlsllkpllddgfgktdrsvllwmpl
vviglmilrgitsyissyciswvsgkvvmtmrrrlfghmmgmpvaffdkqstgtllsrit
ydseqvassssgalitvvregasiiglfimmfyyswqlsiilvvlapivsiairvvskrf
rsisknmqntmgqvttsaeqmlkghkevlifggqevetkrfdkvsnkmrlqgmkmvsass
isdpiiqliaslalafvlyaasfpsvmdsltagtitvvfssmialmrplksltnvnaqfq
rgmaacqtlfaildseqekdegkrvidratgdlefrnvtftypgrevpalrninlkipag
ktvalvgrsgsgkstiaslitrfydideghilmdghdlreytlaslrnqvalvsqnvhlf
ndtvanniayarteeysreqieeaarmayamdfinkmdngldtiigengvllsggqrqri
aiarallrdspilildeatsaldteseraiqaaldelqknrtslviahrlstieqadeiv
vvedgiivergthsellaqhgvyaqlhkmqfg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3b5yB (B:)
mhndkdlstwqtfrrlwptiapfkaglivagialilnaasdtfmlsllkpllddgfgktd
rsvllwmplvviglmilrgitsyissyciswvsgkvvmtmrrrlfghmmgmpvaffdkqs
tgtllsritydseqvassssgalitvvregasiiglfimmfyyswqlsiilvvlapivsi
airvvskrfrsisknmqntmgqvttsaeqmlkghkevlifggqevetkrfdkvsnkmrlq
gmkmvsassisdpiiqliaslalafvlyaasfpsvmdsltagtitvvfssmialmrplks
ltnvnaqfqrgmaacqtlfaildseqekdegkrvidratgdlefrnvtftypgrevpalr
ninlkipagktvalvgrsgsgkstiaslitrfydideghilmdghdlreytlaslrnqva
lvsqnvhlfndtvanniayarteeysreqieeaarmayamdfinkmdngldtiigengvl
lsggqrqriaiarallrdspilildeatsaldteseraiqaaldelqknrtslviahrls
tieqadeivvvedgiivergthsellaqhgvyaqlhkmqfgq

    Sequence, based on observed residues (ATOM records): (download) 
    >3b5yB (B:)
wqtfrrlwptiapfkaglivagialilnaasdtfmlsllkpllddgfgktdrsvllwmpl
vviglmilrgitsyissyciswvsgkvvmtmrrrlfghmmgmpvaffdkqstgtllsrit
ydseqvassssgalitvvregasiiglfimmfyyswqlsiilvvlapivsiairvvskrf
rsisknmqntmgqvttsaeqmlkghkevlifggqevetkrfdkvsnkmrlqgmkmvsass
isdpiiqliaslalafvlyaasfpsvmdsltagtitvvfssmialmrplksltnvnaqfq
rgmaacqtlfaildseqekdegkrvidratgdlefrnvtftypgrevpalrninlkipag
ktvalvgrsgsgkstiaslitrfydideghilmdghdlreytlaslrnqvalvsqnvhlf
ndtvanniayarteeysreqieeaarmayamdfinkmdngldtiigengvllsggqrqri
aiarallrdspilildeatsaldteseraiqaaldelqknrtslviahrlstieqadeiv
vvedgiivergthsellaqhgvyaqlhkmqfg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3b5yC (C:)
mhndkdlstwqtfrrlwptiapfkaglivagialilnaasdtfmlsllkpllddgfgktd
rsvllwmplvviglmilrgitsyissyciswvsgkvvmtmrrrlfghmmgmpvaffdkqs
tgtllsritydseqvassssgalitvvregasiiglfimmfyyswqlsiilvvlapivsi
airvvskrfrsisknmqntmgqvttsaeqmlkghkevlifggqevetkrfdkvsnkmrlq
gmkmvsassisdpiiqliaslalafvlyaasfpsvmdsltagtitvvfssmialmrplks
ltnvnaqfqrgmaacqtlfaildseqekdegkrvidratgdlefrnvtftypgrevpalr
ninlkipagktvalvgrsgsgkstiaslitrfydideghilmdghdlreytlaslrnqva
lvsqnvhlfndtvanniayarteeysreqieeaarmayamdfinkmdngldtiigengvl
lsggqrqriaiarallrdspilildeatsaldteseraiqaaldelqknrtslviahrls
tieqadeivvvedgiivergthsellaqhgvyaqlhkmqfgq

    Sequence, based on observed residues (ATOM records): (download) 
    >3b5yC (C:)
wqtfrrlwptiapfkaglivagialilnaasdtfmlsllkpllddgfgktdrsvllwmpl
vviglmilrgitsyissyciswvsgkvvmtmrrrlfghmmgmpvaffdkqstgtllsrit
ydseqvassssgalitvvregasiiglfimmfyyswqlsiilvvlapivsiairvvskrf
rsisknmqntmgqvttsaeqmlkghkevlifggqevetkrfdkvsnkmrlqgmkmvsass
isdpiiqliaslalafvlyaasfpsvmdsltagtitvvfssmialmrplksltnvnaqfq
rgmaacqtlfaildseqekdegkrvidratgdlefrnvtftypgrevpalrninlkipag
ktvalvgrsgsgkstiaslitrfydideghilmdghdlreytlaslrnqvalvsqnvhlf
ndtvanniayarteeysreqieeaarmayamdfinkmdngldtiigengvllsggqrqri
aiarallrdspilildeatsaldteseraiqaaldelqknrtslviahrlstieqadeiv
vvedgiivergthsellaqhgvyaqlhkmqfg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3b5yD (D:)
mhndkdlstwqtfrrlwptiapfkaglivagialilnaasdtfmlsllkpllddgfgktd
rsvllwmplvviglmilrgitsyissyciswvsgkvvmtmrrrlfghmmgmpvaffdkqs
tgtllsritydseqvassssgalitvvregasiiglfimmfyyswqlsiilvvlapivsi
airvvskrfrsisknmqntmgqvttsaeqmlkghkevlifggqevetkrfdkvsnkmrlq
gmkmvsassisdpiiqliaslalafvlyaasfpsvmdsltagtitvvfssmialmrplks
ltnvnaqfqrgmaacqtlfaildseqekdegkrvidratgdlefrnvtftypgrevpalr
ninlkipagktvalvgrsgsgkstiaslitrfydideghilmdghdlreytlaslrnqva
lvsqnvhlfndtvanniayarteeysreqieeaarmayamdfinkmdngldtiigengvl
lsggqrqriaiarallrdspilildeatsaldteseraiqaaldelqknrtslviahrls
tieqadeivvvedgiivergthsellaqhgvyaqlhkmqfgq

    Sequence, based on observed residues (ATOM records): (download) 
    >3b5yD (D:)
wqtfrrlwptiapfkaglivagialilnaasdtfmlsllkpllddgfgktdrsvllwmpl
vviglmilrgitsyissyciswvsgkvvmtmrrrlfghmmgmpvaffdkqstgtllsrit
ydseqvassssgalitvvregasiiglfimmfyyswqlsiilvvlapivsiairvvskrf
rsisknmqntmgqvttsaeqmlkghkevlifggqevetkrfdkvsnkmrlqgmkmvsass
isdpiiqliaslalafvlyaasfpsvmdsltagtitvvfssmialmrplksltnvnaqfq
rgmaacqtlfaildseqekdegkrvidratgdlefrnvtftypgrevpalrninlkipag
ktvalvgrsgsgkstiaslitrfydideghilmdghdlreytlaslrnqvalvsqnvhlf
ndtvanniayarteeysreqieeaarmayamdfinkmdngldtiigengvllsggqrqri
aiarallrdspilildeatsaldteseraiqaaldelqknrtslviahrlstieqadeiv
vvedgiivergthsellaqhgvyaqlhkmqfg