PDB entry 3b40

View 3b40 on RCSB PDB site
Description: crystal structure of the probable dipeptidase pvdm from pseudomonas aeruginosa
Deposited on 2007-10-23, released 2007-11-06
The last revision was dated 2021-10-20, with a file datestamp of 2021-10-15.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable dipeptidase
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: pvdM, PA2393
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9I187 (2-416)
      • expression tag (0-1)
      • engineered mutation (12)
      • engineered mutation (30)
      • engineered mutation (32)
      • engineered mutation (37)
      • engineered mutation (41)
      • engineered mutation (47)
      • engineered mutation (163)
      • engineered mutation (171)
      • engineered mutation (183-184)
      • engineered mutation (282)
  • Heterogens: CD, MG, CA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3b40A (A:)
    slseagyprkvmqhaeelherilsfdsritvpldfgttgnevdkdgpgqldlvkagrgrl
    sgaalaifgwpemwngpnaphkptpgfvdearhqqeirykiltgmvrdfpnqvgiayspe
    dfrrlamegkfaivmsmlnayplgddlsqldkwaargvrmfgfsyvgnndwadssrplpf
    fndspdalgglsplgkqaverlndlgviidvsqmstkaleqvaalsrapivashsapral
    vdikrnlsdhemqlikdsggviqvvgfpaylrplskptldkldalrarfdlpplegldya
    lmpgdpiitiwpeqrfgeyasalygileeepkaglkelvdaidytvkkvgidhvgissdf
    ndgggvdgwkdvseirnvtaelitrgysdadiaklwggnflrawgevqkrakptatp
    

    Sequence, based on observed residues (ATOM records):
    >3b40A (A:)
    yprkvmqhaeelherilsfdsritvpldfgttgnevdkdgpgqldlvkagrgrlsgaala
    ifgwpemwphkptpgfvdearhqqeirykiltgmvrdfpnqvgiayspedfrrlamegkf
    aivmsmlnayplgddlsqldkwaargvrmfgfsyvgnndwadssrplpffndspdalggl
    splgkqaverlndlgviidvsqmstkaleqvaalsrapivashsapralvdikrnlsdhe
    mqlikdsggviqvvgfpaylrplskptldkldalrarfdlpplegldyalmpgdpiitiw
    peqrfgeyasalygileeepkaglkelvdaidytvkkvgidhvgissdfndgggvdgwkd
    vseirnvtaelitrgysdadiaklwggnflrawgevqkra