PDB entry 3b20

View 3b20 on RCSB PDB site
Description: Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with NADfrom Synechococcus elongatus"
Deposited on 2011-07-17, released 2012-01-11
The last revision was dated 2013-06-12, with a file datestamp of 2013-06-07.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.216
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glyceraldehyde 3-phosphate dehydrogenase (NADP+)
    Species: SYNECHOCOCCUS ELONGATUS [TaxId:1140]
    Gene: gap2, Synpcc7942_1742
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Glyceraldehyde 3-phosphate dehydrogenase (NADP+)
    Species: SYNECHOCOCCUS ELONGATUS [TaxId:1140]
    Gene: gap2, Synpcc7942_1742
    Database cross-references and differences (RAF-indexed):
  • Chain 'O':
    Compound: Glyceraldehyde 3-phosphate dehydrogenase (NADP+)
    Species: SYNECHOCOCCUS ELONGATUS [TaxId:1140]
    Gene: gap2, Synpcc7942_1742
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: Glyceraldehyde 3-phosphate dehydrogenase (NADP+)
    Species: SYNECHOCOCCUS ELONGATUS [TaxId:1140]
    Gene: gap2, Synpcc7942_1742
    Database cross-references and differences (RAF-indexed):
  • Chain 'Q':
    Compound: Glyceraldehyde 3-phosphate dehydrogenase (NADP+)
    Species: SYNECHOCOCCUS ELONGATUS [TaxId:1140]
    Gene: gap2, Synpcc7942_1742
    Database cross-references and differences (RAF-indexed):
  • Chain 'R':
    Compound: Glyceraldehyde 3-phosphate dehydrogenase (NADP+)
    Species: SYNECHOCOCCUS ELONGATUS [TaxId:1140]
    Gene: gap2, Synpcc7942_1742
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SO4, NAD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3b20A (A:)
mtirvaingfgrigrnflrcwfgrqntdlevvainntsdartaahlleydsvlgrfnadi
sydensitvngktmkivcdrnplnlpwkewdidlviestgvfvtaegaskhiqagakkvl
itapgkgegvgtyvigvndseyrhedfavisnascttnclapvakvlhdnfgiikgtmtt
thsytldqrildashrdlrraraaavnivptttgaakavalvipelkgklngialrvptp
nvsvvdlvvqvekptiteqvnevlqkasqttmkgiikysdlplvssdfrgtdessivdss
ltlvmdgdlvkviawydnewgysqrvvdlaelaarkwaa

    Sequence, based on observed residues (ATOM records):
    >3b20A (A:)
mtirvaingfgrigrnflrcwfgrqntdlevvainntsdartaahlleydsvlgrfnadi
sydensitvngktmkivcdrnplnlpwkewdidlviestgvfvtaegaskhiqagakkvl
itapgkgegvgtyvigvndseyrhedfavisnascttnclapvakvlhdnfgiikgtmtt
thsytldqrildashrdlrraraaavnivptttgaakavalvipelkgklngialrvptp
nvsvvdlvvqvekptiteqvnevlqkasqttmkgiikysdlplvssdfrgtdessivdss
ltlvmdgdlvkviawydnewgysqrvvdlaelaarkwa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3b20B (B:)
mtirvaingfgrigrnflrcwfgrqntdlevvainntsdartaahlleydsvlgrfnadi
sydensitvngktmkivcdrnplnlpwkewdidlviestgvfvtaegaskhiqagakkvl
itapgkgegvgtyvigvndseyrhedfavisnascttnclapvakvlhdnfgiikgtmtt
thsytldqrildashrdlrraraaavnivptttgaakavalvipelkgklngialrvptp
nvsvvdlvvqvekptiteqvnevlqkasqttmkgiikysdlplvssdfrgtdessivdss
ltlvmdgdlvkviawydnewgysqrvvdlaelaarkwaa

    Sequence, based on observed residues (ATOM records):
    >3b20B (B:)
mtirvaingfgrigrnflrcwfgrqntdlevvainntsdartaahlleydsvlgrfnadi
sydensitvngktmkivcdrnplnlpwkewdidlviestgvfvtaegaskhiqagakkvl
itapgkgegvgtyvigvndseyrhedfavisnascttnclapvakvlhdnfgiikgtmtt
thsytldqrildashrdlrraraaavnivptttgaakavalvipelkgklngialrvptp
nvsvvdlvvqvekptiteqvnevlqkasqttmkgiikysdlplvssdfrgtdessivdss
ltlvmdgdlvkviawydnewgysqrvvdlaelaarkwa

  • Chain 'O':
    Sequence, based on SEQRES records:
    >3b20O (O:)
mtirvaingfgrigrnflrcwfgrqntdlevvainntsdartaahlleydsvlgrfnadi
sydensitvngktmkivcdrnplnlpwkewdidlviestgvfvtaegaskhiqagakkvl
itapgkgegvgtyvigvndseyrhedfavisnascttnclapvakvlhdnfgiikgtmtt
thsytldqrildashrdlrraraaavnivptttgaakavalvipelkgklngialrvptp
nvsvvdlvvqvekptiteqvnevlqkasqttmkgiikysdlplvssdfrgtdessivdss
ltlvmdgdlvkviawydnewgysqrvvdlaelaarkwaa

    Sequence, based on observed residues (ATOM records):
    >3b20O (O:)
tirvaingfgrigrnflrcwfgrqntdlevvainntsdartaahlleydsvlgrfnadis
ydensitvngktmkivcdrnplnlpwkewdidlviestgvfvtaegaskhiqagakkvli
tapgkgegvgtyvigvndseyrhedfavisnascttnclapvakvlhdnfgiikgtmttt
hsytldqrildashrdlrraraaavnivptttgaakavalvipelkgklngialrvptpn
vsvvdlvvqvekptiteqvnevlqkasqttmkgiikysdlplvssdfrgtdessivdssl
tlvmdgdlvkviawydnewgysqrvvdlaelaarkwa

  • Chain 'P':
    Sequence, based on SEQRES records:
    >3b20P (P:)
mtirvaingfgrigrnflrcwfgrqntdlevvainntsdartaahlleydsvlgrfnadi
sydensitvngktmkivcdrnplnlpwkewdidlviestgvfvtaegaskhiqagakkvl
itapgkgegvgtyvigvndseyrhedfavisnascttnclapvakvlhdnfgiikgtmtt
thsytldqrildashrdlrraraaavnivptttgaakavalvipelkgklngialrvptp
nvsvvdlvvqvekptiteqvnevlqkasqttmkgiikysdlplvssdfrgtdessivdss
ltlvmdgdlvkviawydnewgysqrvvdlaelaarkwaa

    Sequence, based on observed residues (ATOM records):
    >3b20P (P:)
mtirvaingfgrigrnflrcwfgrqntdlevvainntsdartaahlleydsvlgrfnadi
sydensitvngktmkivcdrnplnlpwkewdidlviestgvfvtaegaskhiqagakkvl
itapgkgegvgtyvigvndseyrhedfavisnascttnclapvakvlhdnfgiikgtmtt
thsytldqrildashrdlrraraaavnivptttgaakavalvipelkgklngialrvptp
nvsvvdlvvqvekptiteqvnevlqkasqttmkgiikysdlplvssdfrgtdessivdss
ltlvmdgdlvkviawydnewgysqrvvdlaelaarkwa

  • Chain 'Q':
    Sequence, based on SEQRES records:
    >3b20Q (Q:)
mtirvaingfgrigrnflrcwfgrqntdlevvainntsdartaahlleydsvlgrfnadi
sydensitvngktmkivcdrnplnlpwkewdidlviestgvfvtaegaskhiqagakkvl
itapgkgegvgtyvigvndseyrhedfavisnascttnclapvakvlhdnfgiikgtmtt
thsytldqrildashrdlrraraaavnivptttgaakavalvipelkgklngialrvptp
nvsvvdlvvqvekptiteqvnevlqkasqttmkgiikysdlplvssdfrgtdessivdss
ltlvmdgdlvkviawydnewgysqrvvdlaelaarkwaa

    Sequence, based on observed residues (ATOM records):
    >3b20Q (Q:)
mtirvaingfgrigrnflrcwfgrqntdlevvainntsdartaahlleydsvlgrfnadi
sydensitvngktmkivcdrnplnlpwkewdidlviestgvfvtaegaskhiqagakkvl
itapgkgegvgtyvigvndseyrhedfavisnascttnclapvakvlhdnfgiikgtmtt
thsytldqrildashrdlrraraaavnivptttgaakavalvipelkgklngialrvptp
nvsvvdlvvqvekptiteqvnevlqkasqttmkgiikysdlplvssdfrgtdessivdss
ltlvmdgdlvkviawydnewgysqrvvdlaelaarkwa

  • Chain 'R':
    Sequence, based on SEQRES records:
    >3b20R (R:)
mtirvaingfgrigrnflrcwfgrqntdlevvainntsdartaahlleydsvlgrfnadi
sydensitvngktmkivcdrnplnlpwkewdidlviestgvfvtaegaskhiqagakkvl
itapgkgegvgtyvigvndseyrhedfavisnascttnclapvakvlhdnfgiikgtmtt
thsytldqrildashrdlrraraaavnivptttgaakavalvipelkgklngialrvptp
nvsvvdlvvqvekptiteqvnevlqkasqttmkgiikysdlplvssdfrgtdessivdss
ltlvmdgdlvkviawydnewgysqrvvdlaelaarkwaa

    Sequence, based on observed residues (ATOM records):
    >3b20R (R:)
mtirvaingfgrigrnflrcwfgrqntdlevvainntsdartaahlleydsvlgrfnadi
sydensitvngktmkivcdrnplnlpwkewdidlviestgvfvtaegaskhiqagakkvl
itapgkgegvgtyvigvndseyrhedfavisnascttnclapvakvlhdnfgiikgtmtt
thsytldqrildashrdlrraraaavnivptttgaakavalvipelkgklngialrvptp
nvsvvdlvvqvekptiteqvnevlqkasqttmkgiikysdlplvssdfrgtdessivdss
ltlvmdgdlvkviawydnewgysqrvvdlaelaarkwa