PDB entry 3ayi

View 3ayi on RCSB PDB site
Description: X-ray crystal structures of L-phenylalanine oxidase (deaminating and decaboxylating) from Pseudomonas sp. P501. Structures of the enzyme-ligand complex and catalytic mechanism
Deposited on 2011-05-07, released 2011-08-31
The last revision was dated 2013-06-19, with a file datestamp of 2013-06-14.
Experiment type: XRAY
Resolution: 1.25 Å
R-factor: 0.105
AEROSPACI score: 0.84 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pro-enzyme of L-phenylalanine oxidase
    Species: Pseudomonas [TaxId:266807]
    Gene: propao
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Pro-enzyme of L-phenylalanine oxidase
    Species: Pseudomonas [TaxId:266807]
    Gene: propao
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SO4, FAD, HCI, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3ayiA (A:)
gvtviprllglkdekkiattvgearlsginyrhpdsalvsypvaaaaplgrlpagnyria
ivgggaggiaalyelgrlaatlpagsgidvqiyeadpdsflhdrpgikaikvrglkagrv
saalvhngdpasgdtiyevgamrfpeiagltwhyasaafgdaapikvfpnpgkvptefvf
gnrvdryvgsdpkdwedpdsptlkvlgvvagglvgnpqgenvamypianvdpakiaailn
aatppadaleriqtkywpefiaqydgltlgaavreivtvafekgtlppvdgvldvdesis
yyvelfgrfgfgtggfkplynislvemmrlilwdysneytlpvtenvefirnlflkaqnv
gagklvvqvrqervanachsgtasaraqllsydshnavhseaydfvilavphdqltpivs
rsgfehaasqnlgdaglglethtynqvypplllsdsspaanarivtaigqlhmarsskvf
atvktaaldqpwvpqwrgepikavvsdsglaasyvvpspivedgqapeyssllasytwed
dstrlrhdfglypqnpatetgtadgmyrtmvnrayryvkyagasnaqpwwfyqllaeart
adrfvfdwttnktaggfkldmtgdhhqsnlcfryhthalaasldnrffiasdsyshlggw
legafmsalnavaglivranrgdvsalstearplviglrpvvkvpaaelatsqlehhhhh
h

    Sequence, based on observed residues (ATOM records):
    >3ayiA (A:)
kiattvgearlsginyrhpdsalvsypvaaaaplgrlpagnyriaivgggaggiaalyel
grlaatlpagsgidvqiyeadpdsflhdraikvrglkagrvsaalvhngdpasgdtiyev
gamrfpeiagltwhyasaafgdaapikvfpnpgkvptefvfgnrvdryvgsdpkdwedpd
sptlkvlgvvagglvgnpqgenvamypianvdpakiaailnaatppadaleriqtkywpe
fiaqydgltlgaavreivtvafekgtlppvdgvldvdesisyyvelfgrfgfgtggfkpl
ynislvemmrlilwdysneytlpvtenvefirnlflkaqnvgagklvvqvrqervanach
sgtasaraqllsydshnavhseaydfvilavphdqltpivsrsgfehaasqnlgdaglgl
ethtynqvypplllsdsspaanarivtaigqlhmarsskvfatvktaaldqpwvpqwrge
pikavvsdsglaasyvvpspivapeyssllasytweddstrlrhdfglypqnpatetgta
dgmyrtmvnrayryvkyagasnaqpwwfyqllaeartadrfvfdwttnktaggfkldmtg
dhhqsnlcfryhthalaasldnrffiasdsyshlggwlegafmsalnavaglivranrgd
vsalstearplviglrpvvkvpaa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3ayiB (B:)
gvtviprllglkdekkiattvgearlsginyrhpdsalvsypvaaaaplgrlpagnyria
ivgggaggiaalyelgrlaatlpagsgidvqiyeadpdsflhdrpgikaikvrglkagrv
saalvhngdpasgdtiyevgamrfpeiagltwhyasaafgdaapikvfpnpgkvptefvf
gnrvdryvgsdpkdwedpdsptlkvlgvvagglvgnpqgenvamypianvdpakiaailn
aatppadaleriqtkywpefiaqydgltlgaavreivtvafekgtlppvdgvldvdesis
yyvelfgrfgfgtggfkplynislvemmrlilwdysneytlpvtenvefirnlflkaqnv
gagklvvqvrqervanachsgtasaraqllsydshnavhseaydfvilavphdqltpivs
rsgfehaasqnlgdaglglethtynqvypplllsdsspaanarivtaigqlhmarsskvf
atvktaaldqpwvpqwrgepikavvsdsglaasyvvpspivedgqapeyssllasytwed
dstrlrhdfglypqnpatetgtadgmyrtmvnrayryvkyagasnaqpwwfyqllaeart
adrfvfdwttnktaggfkldmtgdhhqsnlcfryhthalaasldnrffiasdsyshlggw
legafmsalnavaglivranrgdvsalstearplviglrpvvkvpaaelatsqlehhhhh
h

    Sequence, based on observed residues (ATOM records):
    >3ayiB (B:)
kiattvgearlsginyrhpdsalvsypvaaaaplgrlpagnyriaivgggaggiaalyel
grlaatlpagsgidvqiyeadpdsflhdraikvrglkagrvsaalvhngdpasgdtiyev
gamrfpeiagltwhyasaafgdaapikvfpnpgkvptefvfgnrvdryvgsdpkdwedpd
sptlkvlgvvagglvgnpqgenvamypianvdpakiaailnaatppadaleriqtkywpe
fiaqydgltlgaavreivtvafekgtlppvdgvldvdesisyyvelfgrfgfgtggfkpl
ynislvemmrlilwdysneytlpvtenvefirnlflkaqnvgagklvvqvrqervanach
sgtasaraqllsydshnavhseaydfvilavphdqltpivsrsgfehaasqnlgdaglgl
ethtynqvypplllsdsspaanarivtaigqlhmarsskvfatvktaaldqpwvpqwrge
pikavvsdsglaasyvvpspivapeyssllasytweddstrlrhdfglypqnpatetgta
dgmyrtmvnrayryvkyagasnaqpwwfyqllaeartadrfvfdwttnktaggfkldmtg
dhhqsnlcfryhthalaasldnrffiasdsyshlggwlegafmsalnavaglivranrgd
vsalstearplviglrpvvkvpaa