PDB entry 3avv

View 3avv on RCSB PDB site
Description: structure of viral rna polymerase complex 3
Deposited on 2011-03-08, released 2012-01-18
The last revision was dated 2017-06-28, with a file datestamp of 2017-06-23.
Experiment type: XRAY
Resolution: 3.12 Å
R-factor: N/A
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Elongation factor Ts, Elongation factor Tu, LINKER, Q beta replicase
    Species: Escherichia phage Qbeta [TaxId:39803]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A6P3 (Start-282)
      • linker (283)
    • Uniprot P0A6N3 (284-677)
    • PDB 3AVV (678-End)
    • Uniprot Q8LTE0
  • Chain 'G':
    Compound: RNA (5'-r(*gp*gp*gp*up*cp*cp*ap*u)-3')
  • Chain 'T':
    Compound: RNA (5'-r(*ap*ap*cp*gp*ap*up*gp*gp*ap*cp*cp*cp*a)-3')
  • Heterogens: CA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3avvA (A:)
maeitaslvkelrertgagmmdckkalteangdielaienmrksgaikaakkagnvaadg
viktkidgnygiilevncqtdfvakdagfqafadkvldaavagkitdvevlkaqfeeerv
alvakigeninirrvaalegdvlgsyqhgarigvlvaakgadeelvkhiamhvaaskpef
ikpedvsaevvekeyqvqldiamqsgkpkeiaekmvegrmkkftgevsltgqpfvmepsk
tvgqllkehnaevtgfirfevgegiekvetdfaaevaamskqshmskekfertkphvnvg
tighvdhgkttltaaittvlaktyggaarafdqidnapeekargitintshveydtptrh
yahvdcpghadyvknmitgaaqmdgailvvaatdgpmpqtrehillgrqvgvpyiivfln
kcdmvddeellelvemevrellsqydfpgddtpivrgsalkalegdaeweakilelagfl
dsyipeperaidkpfllpiedvfsisgrgtvvtgrvergiikvgeeveivgiketqkstc
tgvemfrklldegragenvgvllrgikreeiergqvlakpgtikphtkfesevyilskde
ggrhtpffkgyrpqfyfrttdvtgtielpegvemvmpgdnikmvvtlihpiamddglrfa
ireggrtvgagvvakvlsgasgaaggggsggggsmsktassrnslsaqlrraantrieve
gnlalsiandlllaygqspfnseaecisfsprfdgtpddfrinylkaeimskyddfslgi
dteavawekflaaeaecaltnarlyrpdysedfnfslgescihmarrkiakligdvpsve
gmlrhcrfsggatttnnrsyghpsfkfalpqactpralkyvlalrasthfdirisdispf
nkavtvpknsktdrciaiepgwnmffqlgiggilrdrlrcwgidlndqtinqrrahegsv
tnnlatvdlsaasdsislalcelllppgwfevlmdlrspkgrlpdgsvvtyekissmgng
ytfeleslifaslarsvceildldssevtvygddiilpscavpalrevfkyvgfttntkk
tfsegpfrescgkhyysgvdvtpfyirhrivspadlilvlnnlyrwatidgvwdprahsv
ylkyrkllpkqlqrntipdgygdgalvgsvlinpfaknrgwiryvpvitdhtrdrerael
gsylydlfsrclsesndglplrgpsgcdsadlfaidqlicrsnptkisrstgkfdiqyia
cssrvlapygvfqgtkvaslheahhhhhh

    Sequence, based on observed residues (ATOM records):
    >3avvA (A:)
aeitaslvkelrertgagmmdckkalteangdielaienmrksgaikaakkagnvaadgv
iktkidgnygiilevncqtdfvakdagfqafadkvldaavagkitdvevlkaqfeeerva
lvakigeninirrvaalegdvlgsyqhgarigvlvaakgadeelvkhiamhvaaskpefi
kpedvsaevvekeyqvqldiamqsgkpkeiaekmvegrmkkftgevsltgqpfvmepskt
vgqllkehnaevtgfirfevgegiekvetdfaaevaamskqshmsfertkphvnvgtigh
vdhgkttltaaittvlaktyggntshveydtptrhyahvdcpghadyvknmitgaaqmdg
ailvvaatdgpmpqtrehillgrqvgvpyiivflnkcdmvddeellelvemevrellsqy
dfpgddtpivrgsalkalegdaeweakilelagfldsyipeperaidkpfllpiedvfsi
sgrgtvvtgrvergiikvgeeveivgiketqkstctgvemfrklldegragenvgvllrg
ikreeiergqvlakpgtikphtkfesevyilskdeggrhtpffkgyrpqfyfrttdvtgt
ielpegvemvmpgdnikmvvtlihpiamddglrfaireggrtvgagvvakvlsgassrns
lsaqlrraantrievegnlalsiandlllaygqspfnseaecisfsprfdgtpddfriny
lkaeimskyddfslgidteavawekflaaeaecaltnarlyrpdysedfnfslgescihm
arrkiakligdvpsvegmlrhcrfsggatttnnrsyghpsfkfalpqactpralkyvlal
rasthfdirisdispfnkavtvpknsktdrciaiepgwnmffqlgiggilrdrlrcwgid
lndqtinqrrahegsvtnnlatvdlsaasdsislalcelllppgwfevlmdlrspkgrlp
dgsvvtyekissmgngytfeleslifaslarsvceildldssevtvygddiilpscavpa
lrevfkyvgfttntkktfsegpfrescgkhyysgvdvtpfyirhrivspadlilvlnnly
rwatidgvwdprahsvylkyrkllpkqlqrntipdgygdgalvgsvlinpfaknrgwiry
vpvitdhtrdreraelgsylydlfsrclsesnaidqlicrsnptkisrstgkfdiqyiac
ssr

  • Chain 'G':
    No sequence available.

  • Chain 'T':
    No sequence available.