PDB entry 3apg

View 3apg on RCSB PDB site
Description: Crystal structure of hyperthermophilic beta-glucosidase from pyrococcus furiosus
Class: hydrolase
Keywords: TIM barrel, Hydrolase, Sugar binding, Hydrolysis
Deposited on 2010-10-15, released 2011-10-19
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-10-19, with a file datestamp of 2011-10-14.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: 0.18
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-glucosidase
    Species: Pyrococcus furiosus [TaxId:2261]
    Gene: CELB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q51723 (2-End)
      • expression tag (1)
    Domains in SCOPe 2.05: d3apga_
  • Chain 'B':
    Compound: Beta-glucosidase
    Species: Pyrococcus furiosus [TaxId:2261]
    Gene: CELB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q51723 (2-End)
      • expression tag (1)
    Domains in SCOPe 2.05: d3apgb_
  • Chain 'C':
    Compound: Beta-glucosidase
    Species: Pyrococcus furiosus [TaxId:2261]
    Gene: CELB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q51723 (2-End)
      • expression tag (1)
    Domains in SCOPe 2.05: d3apgc_
  • Chain 'D':
    Compound: Beta-glucosidase
    Species: Pyrococcus furiosus [TaxId:2261]
    Gene: CELB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q51723 (2-End)
      • expression tag (1)
    Domains in SCOPe 2.05: d3apgd_
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3apgA (A:)
makfpknfmfgyswsgfqfemglpgsevesdwwvwvhdkeniasglvsgdlpengpaywh
lykqdhdiaeklgmdcirggiewarifpkptfdvkvdvekdeegniisvdvpestikele
kianmealehyrkiysdwkergktfilnlyhwplplwihdpiavrklgpdrapagwldek
tvvefvkfaafvayhlddlvdmwstmnepnvvynqgyinlrsgfppgylsfeaaekakfn
liqahigaydaikeyseksvgviyafawhdplaeeykdeveeirkkdyefvtilhskgkl
dwigvnyysrlvygakdghlvplpgygfmserggfaksgrpasdfgwemypeglenllky
lnnayelpmiitengmadaadryrphylvshlkavynamkegadvrgylhwsltdnyewa
qgfrmrfglvyvdfetkkrylrpsalvfreiatqkeipeelahladlkfvtrk

    Sequence, based on observed residues (ATOM records): (download) 
    >3apgA (A:)
akfpknfmfgyswsgfqfemglpgsevesdwwvwvhdkeniasglvsgdlpengpaywhl
ykqdhdiaeklgmdcirggiewarifpkptfdvkvdvekdeegniisvdvpestikelek
ianmealehyrkiysdwkergktfilnlyhwplplwihdpiavrklgpdrapagwldekt
vvefvkfaafvayhlddlvdmwstmnepnvvynqgyinlrsgfppgylsfeaaekakfnl
iqahigaydaikeyseksvgviyafawhdplaeeykdeveeirkkdyefvtilhskgkld
wigvnyysrlvygakdghlvplpgygfmserggfaksgrpasdfgwemypeglenllkyl
nnayelpmiitengmadaadryrphylvshlkavynamkegadvrgylhwsltdnyewaq
gfrmrfglvyvdfetkkrylrpsalvfreiatqkeipeelahladlkfvtr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3apgB (B:)
makfpknfmfgyswsgfqfemglpgsevesdwwvwvhdkeniasglvsgdlpengpaywh
lykqdhdiaeklgmdcirggiewarifpkptfdvkvdvekdeegniisvdvpestikele
kianmealehyrkiysdwkergktfilnlyhwplplwihdpiavrklgpdrapagwldek
tvvefvkfaafvayhlddlvdmwstmnepnvvynqgyinlrsgfppgylsfeaaekakfn
liqahigaydaikeyseksvgviyafawhdplaeeykdeveeirkkdyefvtilhskgkl
dwigvnyysrlvygakdghlvplpgygfmserggfaksgrpasdfgwemypeglenllky
lnnayelpmiitengmadaadryrphylvshlkavynamkegadvrgylhwsltdnyewa
qgfrmrfglvyvdfetkkrylrpsalvfreiatqkeipeelahladlkfvtrk

    Sequence, based on observed residues (ATOM records): (download) 
    >3apgB (B:)
akfpknfmfgyswsgfqfemglpgsevesdwwvwvhdkeniasglvsgdlpengpaywhl
ykqdhdiaeklgmdcirggiewarifpkptfdvkvdvekdeegniisvdvpestikelek
ianmealehyrkiysdwkergktfilnlyhwplplwihdpiavrklgpdrapagwldekt
vvefvkfaafvayhlddlvdmwstmnepnvvynqgyinlrsgfppgylsfeaaekakfnl
iqahigaydaikeyseksvgviyafawhdplaeeykdeveeirkkdyefvtilhskgkld
wigvnyysrlvygakdghlvplpgygfmserggfaksgrpasdfgwemypeglenllkyl
nnayelpmiitengmadaadryrphylvshlkavynamkegadvrgylhwsltdnyewaq
gfrmrfglvyvdfetkkrylrpsalvfreiatqkeipeelahladlkfvtr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3apgC (C:)
makfpknfmfgyswsgfqfemglpgsevesdwwvwvhdkeniasglvsgdlpengpaywh
lykqdhdiaeklgmdcirggiewarifpkptfdvkvdvekdeegniisvdvpestikele
kianmealehyrkiysdwkergktfilnlyhwplplwihdpiavrklgpdrapagwldek
tvvefvkfaafvayhlddlvdmwstmnepnvvynqgyinlrsgfppgylsfeaaekakfn
liqahigaydaikeyseksvgviyafawhdplaeeykdeveeirkkdyefvtilhskgkl
dwigvnyysrlvygakdghlvplpgygfmserggfaksgrpasdfgwemypeglenllky
lnnayelpmiitengmadaadryrphylvshlkavynamkegadvrgylhwsltdnyewa
qgfrmrfglvyvdfetkkrylrpsalvfreiatqkeipeelahladlkfvtrk

    Sequence, based on observed residues (ATOM records): (download) 
    >3apgC (C:)
akfpknfmfgyswsgfqfemglpgsevesdwwvwvhdkeniasglvsgdlpengpaywhl
ykqdhdiaeklgmdcirggiewarifpkptfdvkvdvekdeegniisvdvpestikelek
ianmealehyrkiysdwkergktfilnlyhwplplwihdpiavrklgpdrapagwldekt
vvefvkfaafvayhlddlvdmwstmnepnvvynqgyinlrsgfppgylsfeaaekakfnl
iqahigaydaikeyseksvgviyafawhdplaeeykdeveeirkkdyefvtilhskgkld
wigvnyysrlvygakdghlvplpgygfmserggfaksgrpasdfgwemypeglenllkyl
nnayelpmiitengmadaadryrphylvshlkavynamkegadvrgylhwsltdnyewaq
gfrmrfglvyvdfetkkrylrpsalvfreiatqkeipeelahladlkfvtr

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3apgD (D:)
makfpknfmfgyswsgfqfemglpgsevesdwwvwvhdkeniasglvsgdlpengpaywh
lykqdhdiaeklgmdcirggiewarifpkptfdvkvdvekdeegniisvdvpestikele
kianmealehyrkiysdwkergktfilnlyhwplplwihdpiavrklgpdrapagwldek
tvvefvkfaafvayhlddlvdmwstmnepnvvynqgyinlrsgfppgylsfeaaekakfn
liqahigaydaikeyseksvgviyafawhdplaeeykdeveeirkkdyefvtilhskgkl
dwigvnyysrlvygakdghlvplpgygfmserggfaksgrpasdfgwemypeglenllky
lnnayelpmiitengmadaadryrphylvshlkavynamkegadvrgylhwsltdnyewa
qgfrmrfglvyvdfetkkrylrpsalvfreiatqkeipeelahladlkfvtrk

    Sequence, based on observed residues (ATOM records): (download) 
    >3apgD (D:)
akfpknfmfgyswsgfqfemglpgsevesdwwvwvhdkeniasglvsgdlpengpaywhl
ykqdhdiaeklgmdcirggiewarifpkptfdvkvdvekdeegniisvdvpestikelek
ianmealehyrkiysdwkergktfilnlyhwplplwihdpiavrklgpdrapagwldekt
vvefvkfaafvayhlddlvdmwstmnepnvvynqgyinlrsgfppgylsfeaaekakfnl
iqahigaydaikeyseksvgviyafawhdplaeeykdeveeirkkdyefvtilhskgkld
wigvnyysrlvygakdghlvplpgygfmserggfaksgrpasdfgwemypeglenllkyl
nnayelpmiitengmadaadryrphylvshlkavynamkegadvrgylhwsltdnyewaq
gfrmrfglvyvdfetkkrylrpsalvfreiatqkeipeelahladlkfvtr