SCOPe 2.08: Structural Classification of Proteins

PDB entry 3aog

View 3aog on RCSB PDB site
Description: Crystal structure of glutamate dehydrogenase (GdhB) from Thermus thermophilus (Glu bound form)
Class: oxidoreductase
Keywords: glutamate dehydrogenase, dehydrogenase, NAD(H), OXIDOREDUCTASE
Deposited on 2010-09-28, released 2011-09-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-09-07, with a file datestamp of 2011-09-02.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.228
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: glutamate dehydrogenase
Species: Thermus thermophilus HB27 [TaxId:262724]
Gene: TT_C1211
Database cross-references and differences (RAF-indexed):
- Uniprot Q72IC1 (Start-439)
Domains in SCOPe 2.08: d3aoga1, d3aoga2
Chain 'B':
Compound: glutamate dehydrogenase
Species: Thermus thermophilus HB27 [TaxId:262724]
Gene: TT_C1211
Database cross-references and differences (RAF-indexed):
- Uniprot Q72IC1 (Start-439)
Domains in SCOPe 2.08: d3aogb1, d3aogb2
Chain 'C':
Compound: glutamate dehydrogenase
Species: Thermus thermophilus HB27 [TaxId:262724]
Gene: TT_C1211
Database cross-references and differences (RAF-indexed):
- Uniprot Q72IC1 (Start-439)
Domains in SCOPe 2.08: d3aogc1, d3aogc2
Chain 'D':
Compound: glutamate dehydrogenase
Species: Thermus thermophilus HB27 [TaxId:262724]
Gene: TT_C1211
Database cross-references and differences (RAF-indexed):
- Uniprot Q72IC1 (Start-439)
Domains in SCOPe 2.08: d3aogd1, d3aogd2
Chain 'E':
Compound: glutamate dehydrogenase
Species: Thermus thermophilus HB27 [TaxId:262724]
Gene: TT_C1211
Database cross-references and differences (RAF-indexed):
- Uniprot Q72IC1 (Start-439)
Domains in SCOPe 2.08: d3aoge1, d3aoge2
Chain 'F':
Compound: glutamate dehydrogenase
Species: Thermus thermophilus HB27 [TaxId:262724]
Gene: TT_C1211
Database cross-references and differences (RAF-indexed):
- Uniprot Q72IC1 (Start-439)
Domains in SCOPe 2.08: d3aogf1, d3aogf2
Chain 'G':
Compound: glutamate dehydrogenase
Species: Thermus thermophilus HB27 [TaxId:262724]
Gene: TT_C1211
Database cross-references and differences (RAF-indexed):
- Uniprot Q72IC1 (Start-439)
Domains in SCOPe 2.08: d3aogg1, d3aogg2
Chain 'H':
Compound: glutamate dehydrogenase
Species: Thermus thermophilus HB27 [TaxId:262724]
Gene: TT_C1211
Database cross-references and differences (RAF-indexed):
- Uniprot Q72IC1 (Start-439)
Domains in SCOPe 2.08: d3aogh1, d3aogh2
Chain 'I':
Compound: glutamate dehydrogenase
Species: Thermus thermophilus HB27 [TaxId:262724]
Gene: TT_C1211
Database cross-references and differences (RAF-indexed):
- Uniprot Q72IC1 (Start-439)
Domains in SCOPe 2.08: d3aogi1, d3aogi2
Chain 'J':
Compound: glutamate dehydrogenase
Species: Thermus thermophilus HB27 [TaxId:262724]
Gene: TT_C1211
Database cross-references and differences (RAF-indexed):
- Uniprot Q72IC1 (Start-439)
Domains in SCOPe 2.08: d3aogj1, d3aogj2
Chain 'K':
Compound: glutamate dehydrogenase
Species: Thermus thermophilus HB27 [TaxId:262724]
Gene: TT_C1211
Database cross-references and differences (RAF-indexed):
- Uniprot Q72IC1 (Start-439)
Domains in SCOPe 2.08: d3aogk1, d3aogk2
Chain 'L':
Compound: glutamate dehydrogenase
Species: Thermus thermophilus HB27 [TaxId:262724]
Gene: TT_C1211
Database cross-references and differences (RAF-indexed):
- Uniprot Q72IC1 (Start-439)
Domains in SCOPe 2.08: d3aogl1, d3aogl2
Heterogens: GLU, PO4, NH4, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>3aogA (A:)
mgsshhhhhhsqdpnsmkseplsylgkdggpweifteqvdrvvpylgrlaplaeslkrpk
rvlivdvpvrlddgsvayfegyrvhhntargpakggvryhpevtlsevmalagwmtikna
avglpygggkggirvdprklspgelerltrrytseigillgpdrdipapdvntgeremaw
mmdtysmnvgrtvpgvvtgkpialggslgrrdatgrgvfitaaaaaekiglqvegarvai
qgfgnvgnaaarafhdhgarvvavqdhtgtvyneagidpydllrhvqefggvrgypkaep
lpaadfwglpveflvpaalekqiteqnawrirarivaegangpttpaaddillekgvlvv
pdvianaggvtvsyfewvqdfnsyfwteeeinarlervlrnafeavwqvaqekkiplrta
ayvvaatrvlearalrglyp