PDB entry 3alr

View 3alr on RCSB PDB site
Description: crystal structure of nanos
Deposited on 2010-08-06, released 2011-02-02
The last revision was dated 2017-10-11, with a file datestamp of 2017-10-06.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Nanos protein
    Species: Danio rerio [TaxId:7955]
    Gene: nanos
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Nanos protein
    Species: Danio rerio [TaxId:7955]
    Gene: nanos
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Nanos protein
    Species: Danio rerio [TaxId:7955]
    Gene: nanos
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Nanos protein
    Species: Danio rerio [TaxId:7955]
    Gene: nanos
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3alrA (A:)
gplgsespsgpirsrdspeqntspgggkpksspaerkfcsfckhngeteavytshylknr
dgdvmcpylrqykcplcgatgakahtkrfcpmvdknycsvyakstw

    Sequence, based on observed residues (ATOM records):
    >3alrA (A:)
fcsfckhngeteavytshylknrdgdvmcpylrqykcplcgatgakahtkrfcpmvdkny
csv

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3alrB (B:)
gplgsespsgpirsrdspeqntspgggkpksspaerkfcsfckhngeteavytshylknr
dgdvmcpylrqykcplcgatgakahtkrfcpmvdknycsvyakstw

    Sequence, based on observed residues (ATOM records):
    >3alrB (B:)
erkfcsfckhngeteavytshylknrdgdvmcpylrqykcplcgatgakahtkrfcpmvd
knycs

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3alrC (C:)
gplgsespsgpirsrdspeqntspgggkpksspaerkfcsfckhngeteavytshylknr
dgdvmcpylrqykcplcgatgakahtkrfcpmvdknycsvyakstw

    Sequence, based on observed residues (ATOM records):
    >3alrC (C:)
aerkfcsfckhngeteavytshylknrdgdvmcpylrqykcplcgatgakahtkrfcpmv
dknycsv

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3alrD (D:)
gplgsespsgpirsrdspeqntspgggkpksspaerkfcsfckhngeteavytshylknr
dgdvmcpylrqykcplcgatgakahtkrfcpmvdknycsvyakstw

    Sequence, based on observed residues (ATOM records):
    >3alrD (D:)
kfcsfckhngeteavytshylknrdgdvmcpylrqykcplcgatgakahtkrfcp