PDB entry 3ale

View 3ale on RCSB PDB site
Description: A type III polyketide synthase that produces diarylheptanoid
Deposited on 2010-08-03, released 2010-11-03
The last revision was dated 2014-01-22, with a file datestamp of 2014-01-17.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.221
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Os07g0271500 protein
    Species: Oryza sativa [TaxId:39947]
    Gene: OJ1001_C01.122, OSJNBb0002J01.6, Os07g0271500
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8LIL0
      • see remark 999 (59)
  • Chain 'B':
    Compound: Os07g0271500 protein
    Species: Oryza sativa [TaxId:39947]
    Gene: OJ1001_C01.122, OSJNBb0002J01.6, Os07g0271500
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8LIL0
      • see remark 999 (59)
  • Chain 'C':
    Compound: Os07g0271500 protein
    Species: Oryza sativa [TaxId:39947]
    Gene: OJ1001_C01.122, OSJNBb0002J01.6, Os07g0271500
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8LIL0
      • see remark 999 (59)
  • Chain 'D':
    Compound: Os07g0271500 protein
    Species: Oryza sativa [TaxId:39947]
    Gene: OJ1001_C01.122, OSJNBb0002J01.6, Os07g0271500
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8LIL0
      • see remark 999 (59)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3aleA (A:)
mgsshhhhhhsqdpmaptttmgsalyplgemrrsqradglaavlaigtanppncvtqeei
pdfyfrvtnsdhltalkdkfkricqemgvqrrylhhteemlsahpefvdrdapsldarld
iaadavpelaaeaakkaiaewgrpaadithlvvttnsgahvpgvdfrlvpllglrpsvrr
tmlhlngcfagcaalrlakdlaensrgarvlvvaaeltlmyftgpdegcfrtllvqglfg
dgaaavivgadaddverplfeivsaaqtiipesdhalnmrfterrldgvlgrqvpgligd
nverclldmfgpllggdggggwndlfwavhpgsstimdqvdaalglepgklaasrrvlsd
ygnmsgatvifaldelrrqrkeaaaagewpelgvmmafgpgmtvdamllhatshvn

    Sequence, based on observed residues (ATOM records):
    >3aleA (A:)
rsqradglaavlaigtanppncvtqeeipdfyfrvtnsdhltalkdkfkricqemgvqrr
ylhhteemlsahpefvdrdapsldarldiaadavpelaaeaakkaiaewgrpaadithlv
vttnsgahvpgvdfrlvpllglrpsvrrtmlhlngcfagcaalrlakdlaensrgarvlv
vaaeltlmyftgpdegcfrtllvqglfgdgaaavivgadaddverplfeivsaaqtiipe
sdhalnmrfterrldgvlgrqvpgligdnverclldmfgpllggwndlfwavhpgsstim
dqvdaalglepgklaasrrvlsdygnmsgatvifaldelrrqrkwpelgvmmafgpgmtv
damllhats

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3aleB (B:)
mgsshhhhhhsqdpmaptttmgsalyplgemrrsqradglaavlaigtanppncvtqeei
pdfyfrvtnsdhltalkdkfkricqemgvqrrylhhteemlsahpefvdrdapsldarld
iaadavpelaaeaakkaiaewgrpaadithlvvttnsgahvpgvdfrlvpllglrpsvrr
tmlhlngcfagcaalrlakdlaensrgarvlvvaaeltlmyftgpdegcfrtllvqglfg
dgaaavivgadaddverplfeivsaaqtiipesdhalnmrfterrldgvlgrqvpgligd
nverclldmfgpllggdggggwndlfwavhpgsstimdqvdaalglepgklaasrrvlsd
ygnmsgatvifaldelrrqrkeaaaagewpelgvmmafgpgmtvdamllhatshvn

    Sequence, based on observed residues (ATOM records):
    >3aleB (B:)
sqradglaavlaigtanppncvtqeeipdfyfrvtnsdhltalkdkfkricqemgvqrry
lhhteemlsahpefvdrdapsldarldiaadavpelaaeaakkaiaewgrpaadithlvv
ttnsgahvpgvdfrlvpllglrpsvrrtmlhlngcfagcaalrlakdlaensrgarvlvv
aaeltlmyftgpdegcfrtllvqglfgdgaaavivgadaddverplfeivsaaqtiipes
dhalnmrfterrldgvlgrqvpgligdnverclldmfgpggwndlfwavhpgsstimdqv
daalglepgklaasrrvlsdygnmsgatvifaldelrrqrkwpelgvmmafgpgmtvdam
llhats

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3aleC (C:)
mgsshhhhhhsqdpmaptttmgsalyplgemrrsqradglaavlaigtanppncvtqeei
pdfyfrvtnsdhltalkdkfkricqemgvqrrylhhteemlsahpefvdrdapsldarld
iaadavpelaaeaakkaiaewgrpaadithlvvttnsgahvpgvdfrlvpllglrpsvrr
tmlhlngcfagcaalrlakdlaensrgarvlvvaaeltlmyftgpdegcfrtllvqglfg
dgaaavivgadaddverplfeivsaaqtiipesdhalnmrfterrldgvlgrqvpgligd
nverclldmfgpllggdggggwndlfwavhpgsstimdqvdaalglepgklaasrrvlsd
ygnmsgatvifaldelrrqrkeaaaagewpelgvmmafgpgmtvdamllhatshvn

    Sequence, based on observed residues (ATOM records):
    >3aleC (C:)
qradglaavlaigtanppncvtqeeipdfyfrvtnsdhltalkdkfkricqemgvqrryl
hhteemlsahpefvdrdapsldarldiaadavpelaaeaakkaiaewgrpaadithlvvt
tnsgahvpgvdfrlvpllglrpsvrrtmlhlngcfagcaalrlakdlaensrgarvlvva
aeltlmyftgpdegcfrtllvqglfgdgaaavivgadaddverplfeivsaaqtiipesd
halnmrfterrldgvlgrqvpgligdnverclldmfgpgwndlfwavhpgsstimdqvda
alglepgklaasrrvlsdygnmsgatvifaldelrrqrkwpelgvmmafgpgmtvdamll
hats

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3aleD (D:)
mgsshhhhhhsqdpmaptttmgsalyplgemrrsqradglaavlaigtanppncvtqeei
pdfyfrvtnsdhltalkdkfkricqemgvqrrylhhteemlsahpefvdrdapsldarld
iaadavpelaaeaakkaiaewgrpaadithlvvttnsgahvpgvdfrlvpllglrpsvrr
tmlhlngcfagcaalrlakdlaensrgarvlvvaaeltlmyftgpdegcfrtllvqglfg
dgaaavivgadaddverplfeivsaaqtiipesdhalnmrfterrldgvlgrqvpgligd
nverclldmfgpllggdggggwndlfwavhpgsstimdqvdaalglepgklaasrrvlsd
ygnmsgatvifaldelrrqrkeaaaagewpelgvmmafgpgmtvdamllhatshvn

    Sequence, based on observed residues (ATOM records):
    >3aleD (D:)
qradglaavlaigtanppncvtqeeipdfyfrvtnsdhltalkdkfkricqemgvqrryl
hhteemlsahpefvdrdapsldarldiaadavpelaaeaakkaiaewgrpaadithlvvt
tnsgahvpgvdfrlvpllglrpsvrrtmlhlngcfagcaalrlakdlaensrgarvlvva
aeltlmyftgpcfrtllvqglfgdgaaavivgadaddverplfeivsaaqtiipesdhal
nmrfterrldgvlgrqvpgligdnverclldmfgpgwndlfwavhpgsstimdqvdaalg
lepgklaasrrvlsdygnmsgatvifaldelrrqrkwpelgvmmafgpgmtvdamllhat
s