PDB entry 3al8

View 3al8 on RCSB PDB site
Description: plexin a2 / semaphorin 6a complex
Deposited on 2010-07-28, released 2010-10-06
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 3.6 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Semaphorin-6A
    Species: Mus musculus [TaxId:10090]
    Gene: Sema6a, Semaq
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Plexin-A2
    Species: Mus musculus [TaxId:10090]
    Gene: Plxna2, Kiaa0463
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3al8A (A:)
    gssrgfpedsepisishgnytkqypvfvghkpgrnttqrhrldiqmimimnrtlyvaard
    hiytvdidtshteeiycskkltwksrqadvdtcrmkgkhkdechnfikvllkknddtlfv
    cgtnafnpscrnyrvdtletfgdefsgmarcpydakhanialfadgklysatvtdflaid
    aviyrslgdsptlrtvkhdskwlkepyfvqavdygdyiyfffreiaveyntmgkvvfprv
    aqvckndmggsqrvlekqwtsflkarlncsvpgdshfyfnilqavtdviringrdvvlat
    fstpynsipgsavcaydmldianvftgrfkeqkspdstwtpvpdervpkprpgccagsss
    lekyatsnefpddtlnfikthplmdeavpsiinrpwflrtmvryrltkiavdnaagpyqn
    htvvflgsekgiilkflarigssgflngslfleemnvynpekcsydgvedkrimgmqldr
    asgslyvafstcvikvplgrcerhgkckktciasrdpycgwvresgscahlsplsrltfe
    qdiergntdglgdchn
    

    Sequence, based on observed residues (ATOM records):
    >3al8A (A:)
    gfpedsepisitkqypvfvghrhrldiqmimimnrtlyvaardhiytvdidtshteeiyc
    skkltwksrqadvdtcrmkgkhkdechnfikvllkknddtlfvcgtnafnpscrnyrvdt
    letfgdefsgmarcpydakhanialfadgklysatvtdflaidaviyrslgdsptlrtvk
    hdskwlkepyfvqavdygdyiyfffreiaveyntmgkvvfprvaqvckndmggsqrvlek
    qwtsflkarlncsvpgdshfyfnilqavtdviringrdvvlatfstpynsipgsavcayd
    mldianvftgrfkeqkspdstwtpvpdervpkprpgccagssslekyatsnefpddtlnf
    ikthplmdeavpsiinrpwflrtmvryrltkiavdnaagpyqnhtvvflgsekgiilkfl
    arigssgflngslfleemnvynpekcsydgvedkrimgmqldrasgslyvafstcvikvp
    lgrcerhgkckktciasrdpycgwvresgscahlsplsrltfeqdiergntdglgdc
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3al8B (B:)
    gttgmpqystfhsenrdwtfnhltvhrrtgavyvgainrvykltgnltiqvahktgpeed
    nkacypplivqpcsevltltnnvnklliidysenrllacgslyqgvckllrlddlfilve
    pshkkehylssvnktgtmygvivrsegedgklfigtavdgkqdyfptlssrklprdpess
    amldyelhsdfvsslikipsdtlalvshfdifyiygfasggfvyfltvqpetpdgmains
    agdlfytsrivrlckddpkfhsyvslpfgctragveyrllqaaylakpgealaqafniss
    dedvlfaifskgqkqyhhppddsalcafpirainlqikerlqscyhgegnlelnwllgkd
    vqctkapvpiddnfcgldinqplggstpvegltlyttsrdrltsvasyvyngysvvfvgt
    ksgklkkiradgpphggvqyemvsvfkdgspilrdmafsinqlylyvmserqvtrvpves
    ceqyttcgeclssgdphcgwcalhnmcsrrdkcqraweanrfaasisqcmssrenlyfq
    

    Sequence, based on observed residues (ATOM records):
    >3al8B (B:)
    pqystfhsenrdwtfnhltvhrrtgavyvgainrvykltgnltiqvahktgpeednkacy
    pplivqpcsevltltnnvnklliidysenrllacgslyqgvckllrlddlfilvepshkk
    ehylssvnktgtmygvivrsegedgklfigtavdgkqdyfptlssrklprdpessamldy
    elhsdfvsslikipsdtlalvshfdifyiygfasggfvyfltvqpetpdlfytsrivrlc
    kddpkfhsyvslpfgctragveyrllqaaylakpgealaqafnissdedvlfaifskgqk
    qyhhppddsalcafpirainlqikerlqscyhgegnlelnwllgkdvqctkapvpiddnf
    cgldinqplggstpvegltlyttsrdrltsvasyvyngysvvfvgtksgklkkiradgpp
    hggvqyemvsvfkdgspilrdmafsinqlylyvmserqvtrvpvesceqyttcgeclssg
    dphcgwcalhnmcsrrdkc