PDB entry 3ah5

View 3ah5 on RCSB PDB site
Description: Crystal Structure of flavin dependent thymidylate synthase ThyX from helicobacter pylori complexed with FAD and dUMP
Deposited on 2010-04-14, released 2011-04-20
The last revision was dated 2011-04-20, with a file datestamp of 2011-04-15.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.194
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Thymidylate synthase thyX
    Species: Helicobacter pylori [TaxId:85962]
    Gene: HP_1533, thyX
    Database cross-references and differences (RAF-indexed):
    • Uniprot O26061 (0-207)
      • expression tag (208-214)
  • Chain 'B':
    Compound: Thymidylate synthase thyX
    Species: Helicobacter pylori [TaxId:85962]
    Gene: HP_1533, thyX
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Thymidylate synthase thyX
    Species: Helicobacter pylori [TaxId:85962]
    Gene: HP_1533, thyX
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Thymidylate synthase thyX
    Species: Helicobacter pylori [TaxId:85962]
    Gene: HP_1533, thyX
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Thymidylate synthase thyX
    Species: Helicobacter pylori [TaxId:85962]
    Gene: HP_1533, thyX
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Thymidylate synthase thyX
    Species: Helicobacter pylori [TaxId:85962]
    Gene: HP_1533, thyX
    Database cross-references and differences (RAF-indexed):
  • Heterogens: UMP, FAD, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3ah5A (A:)
mevickhytpldiasqairtcwqsfeysddggckdkelihrvgnifrhsstlehlyynfe
ikglsrgalqelsrhriaslsvkssrytlrelkevesflplnetnlerakeflvfvdnek
vnamsvlalenlrillsehnikndlakyampesykthlaysinarslqnfltlrssnkal
kemqdlakalfdalpgehqylfedclkhlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3ah5A (A:)
mevickhytpldiasqairtcwqsfeysddggckdkelihrvgnifrhsstlehlyynfe
ikglsrgalqelsrhriaslsvkssrytlrelkevesflplnetnlerakeflvfvdnek
vnamsvlalenlrillsehnikndlakyampesykthlaysinarslqnfltlrssnkal
kemqdlakalfdalpgehqylfedclkhlehhhhh

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3ah5B (B:)
mevickhytpldiasqairtcwqsfeysddggckdkelihrvgnifrhsstlehlyynfe
ikglsrgalqelsrhriaslsvkssrytlrelkevesflplnetnlerakeflvfvdnek
vnamsvlalenlrillsehnikndlakyampesykthlaysinarslqnfltlrssnkal
kemqdlakalfdalpgehqylfedclkhlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3ah5B (B:)
mevickhytpldiasqairtcwqsfeysddggckdkelihrvgnifrhsstlehlyynfe
ikglsrgalqelsrhriaslsvkssrytlrelkevesflplnetnlerakeflvfvdnek
vnamsvlalenlrillsehnikndlakyampesykthlaysinarslqnfltlrssnkal
kemqdlakalfdalpgehqylfedclk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3ah5C (C:)
mevickhytpldiasqairtcwqsfeysddggckdkelihrvgnifrhsstlehlyynfe
ikglsrgalqelsrhriaslsvkssrytlrelkevesflplnetnlerakeflvfvdnek
vnamsvlalenlrillsehnikndlakyampesykthlaysinarslqnfltlrssnkal
kemqdlakalfdalpgehqylfedclkhlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3ah5C (C:)
mevickhytpldiasqairtcwqsfeysddggckdkelihrvgnifrhsstlehlyynfe
ikglsrgalqelsrhriaslsvkssrytlrelkevesflplnetnlerakeflvfvdnek
vnamsvlalenlrillsehnikndlakyampesykthlaysinarslqnfltlrssnkal
kemqdlakalfdalpgehqylfedclk

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3ah5D (D:)
mevickhytpldiasqairtcwqsfeysddggckdkelihrvgnifrhsstlehlyynfe
ikglsrgalqelsrhriaslsvkssrytlrelkevesflplnetnlerakeflvfvdnek
vnamsvlalenlrillsehnikndlakyampesykthlaysinarslqnfltlrssnkal
kemqdlakalfdalpgehqylfedclkhlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3ah5D (D:)
mevickhytpldiasqairtcwqsfeysddggckdkelihrvgnifrhsstlehlyynfe
ikglsrgalqelsrhriaslsvkssrytlrelkevesflplnetnlerakeflvfvdnek
vnamsvlalenlrillsehnikndlakyampesykthlaysinarslqnfltlrssnkal
kemqdlakalfdalpgehqylfedclk

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3ah5E (E:)
mevickhytpldiasqairtcwqsfeysddggckdkelihrvgnifrhsstlehlyynfe
ikglsrgalqelsrhriaslsvkssrytlrelkevesflplnetnlerakeflvfvdnek
vnamsvlalenlrillsehnikndlakyampesykthlaysinarslqnfltlrssnkal
kemqdlakalfdalpgehqylfedclkhlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3ah5E (E:)
mevickhytpldiasqairtcwqsfeysddggckdkelihrvgnifrhsstlehlyynfe
ikglsrgalqelsrhriaslsvkssrytlrelkevesflplnetnlerakeflvfvdnek
vnamsvlalenlrillsehnikndlakyampesykthlaysinarslqnfltlrssnkal
kemqdlakalfdalpgehqylfedclk

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3ah5F (F:)
mevickhytpldiasqairtcwqsfeysddggckdkelihrvgnifrhsstlehlyynfe
ikglsrgalqelsrhriaslsvkssrytlrelkevesflplnetnlerakeflvfvdnek
vnamsvlalenlrillsehnikndlakyampesykthlaysinarslqnfltlrssnkal
kemqdlakalfdalpgehqylfedclkhlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >3ah5F (F:)
mevickhytpldiasqairtcwqsfeysddggckdkelihrvgnifrhsstlehlyynfe
ikglsrgalqelsrhriaslsvkssrytlrelkevesflplnetnlerakeflvfvdnek
vnamsvlalenlrillsehnikndlakyampesykthlaysinarslqnfltlrssnkal
kemqdlakalfdalpgehqylfedclk