PDB entry 3afk
View 3afk on RCSB PDB site
Description: Crystal Structure of Agrocybe aegerita lectin AAL complexed with Thomsen-Friedenreich antigen
Class: hydrolase
Keywords: galectin, AAL, Thomsen-Friedenreich antigen, Apoptosis, Hydrolase, Lectin, Nuclease, GAL-BETA-1,3-GALNAC-ALPHA-O-THR
Deposited on
2010-03-09, released
2010-12-01
The last revision prior to the SCOPe 2.07 freeze date was dated
2010-12-01, with a file datestamp of
2010-11-26.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.186
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Anti-tumor lectin
Species: Agrocybe aegerita [TaxId:5400]
Gene: AAL
Database cross-references and differences (RAF-indexed):
- Uniprot Q6WY08 (1-158)
- expression tag (0)
- see remark 999 (132)
- expression tag (159-166)
Domains in SCOPe 2.07: d3afka1, d3afka2, d3afka3 - Chain 'B':
Compound: Anti-tumor lectin
Species: Agrocybe aegerita [TaxId:5400]
Gene: AAL
Database cross-references and differences (RAF-indexed):
- Uniprot Q6WY08 (1-158)
- expression tag (0)
- see remark 999 (132)
- expression tag (159-165)
Domains in SCOPe 2.07: d3afkb1, d3afkb2, d3afkb3 - Heterogens: THR, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3afkA (A:)
mqgvniynisagtsvdlaapvttgdivtffssalnlnagagnpnnttlnlfaengayllh
iafrlqenviifnsrqpdgpwlveqrvsdvanqfagidgkamvtvfdhgdkyqvvinekt
viqytkqisgltsslsynateetsifstvveavtytglalehhhhhh
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3afkB (B:)
mqgvniynisagtsvdlaapvttgdivtffssalnlnagagnpnnttlnlfaengayllh
iafrlqenviifnsrqpdgpwlveqrvsdvanqfagidgkamvtvfdhgdkyqvvinekt
viqytkqisgltsslsynateetsifstvveavtytglalehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3afkB (B:)
mqgvniynisagtsvdlaapvttgdivtffssalnlnagagnpnnttlnlfaengayllh
iafrlqenviifnsrqpdgpwlveqrvsdvanqfagidgkamvtvfdhgdkyqvvinekt
viqytkqisgltsslsynateetsifstvveavtytglalehhhhh