PDB entry 3afh

View 3afh on RCSB PDB site
Description: Crystal structure of Thermotoga maritima nondiscriminating glutamyl-tRNA synthetase in complex with a glutamyl-AMP analog
Class: Ligase
Keywords: PROTEIN-SUBSTRATE COMPLEX, non-discriminating glutamyl-tRNA synthetase, Aminoacyl-tRNA synthetase, ATP-binding, Ligase, Nucleotide-binding, Protein biosynthesis
Deposited on 2010-03-01, released 2010-06-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2010-07-21, with a file datestamp of 2010-07-16.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.186
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamyl-tRNA synthetase 2
    Species: Thermotoga maritima [TaxId:2336]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3afha1, d3afha2
  • Heterogens: GSU, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3afhA (A:)
mgfitgaffdilevgpkkirrcfelvrvrfapsptghlhvggartalfnwmfarkeggkf
ilriedtdterssreyeqqileslrwcgldwdegpdiggdfgpyrqserleiyreyaekl
vedkrayyvvydkedpskelfttyeypheykekghpvtikfkvlpgktsfedllkgymef
dnstledfiimksngfptynfavvvddhlmrishvfrgedhlsntpkqlmiyeafgweap
vfmhiplilgsdrtplskrhgatsvehfrregilsralmnylallgwrvegdeiftieek
lqsfdpkdisnkgvifdyqklewvngkhmrridledlkrefiewakyagkeipsvderyf
setlricrekvntlsqlydimypfmnddyeyekdyvekflkreeaervleeakkafkdln
swnmeeiektlrdlsekglaskkvvfqlirgavtgklvtpglfetievlgkertlkrler
tlqflkkt

    Sequence, based on observed residues (ATOM records): (download) 
    >3afhA (A:)
lvrvrfapsptghlhvggartalfnwmfarkeggkfilriedtdterssreyeqqilesl
rwcgldwdegpdiggdfgpyrqserleiyreyaeklvedkrayyvvydkedpskelftty
eypheykekghpvtikfkvlpgktsfedllkgymefdnstledfiimksngfptynfavv
vddhlmrishvfrgedhlsntpkqlmiyeafgweapvfmhiplilgsdrtplskrhgats
vehfrregilsralmnylallgwrvegdeiftieeklqsfdpkdisnkgvifdyqklewv
ngkhmrridledlkrefiewakyagkeipsvderyfsetlricrekvntlsqlydimypf
mnddyeyekdyvekflkreeaervleeakkafkdlnswnmeeiektlrdlsekglaskkv
vfqlirgavtgklvtpglfetievlgkertlkrlertlqflkk