PDB entry 3adi

View 3adi on RCSB PDB site
Description: Structure of Arabidopsis HYL1 and its molecular implications for miRNA processing
Deposited on 2010-01-22, released 2010-05-26
The last revision was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: 0.215
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: F21M12.9 protein
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: hyl1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O04492 (3-72)
      • expression tag (2)
  • Chain 'B':
    Compound: F21M12.9 protein
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: hyl1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O04492 (3-72)
      • expression tag (2)
  • Chain 'C':
    Compound: F21M12.9 protein
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: hyl1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O04492 (3-72)
      • expression tag (2)
  • Chain 'D':
    Compound: RNA (5'-r(p*cp*up*cp*gp*ap*up*ap*ap*cp*c)-3')
    Species: synthetic, synthetic
  • Chain 'E':
    Compound: RNA (5'-r(*gp*gp*up*up*ap*up*cp*gp*ap*g)-3')
    Species: synthetic, synthetic

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3adiA (A:)
gshvfksrlqeyaqkyklptpvyeivkegpshkslfqstvildgvrynslpgffnrkaae
qsaaevalrelak

    Sequence, based on observed residues (ATOM records):
    >3adiA (A:)
hvfksrlqeyaqkyklptpvyeivkegpshkslfqstvildgvrynslpgffnrkaaeqs
aaevalrelak

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3adiB (B:)
gshvfksrlqeyaqkyklptpvyeivkegpshkslfqstvildgvrynslpgffnrkaae
qsaaevalrelak

    Sequence, based on observed residues (ATOM records):
    >3adiB (B:)
hvfksrlqeyaqkyklptpvyeivkegpshkslfqstvildgvrynslpgffnrkaaeqs
aaevalrelak

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3adiC (C:)
gshvfksrlqeyaqkyklptpvyeivkegpshkslfqstvildgvrynslpgffnrkaae
qsaaevalrelak

    Sequence, based on observed residues (ATOM records):
    >3adiC (C:)
hvfksrlqeyaqkyklptpvyeivkegpshkslfqstvildgvrynslpgffnrkaaeqs
aaevalrelak

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.