PDB entry 3abs

View 3abs on RCSB PDB site
Description: Crystal structure of ethanolamine ammonia-lyase from Escherichia coli complexed with adeninylpentylcobalamin and ethanolamine
Deposited on 2009-12-21, released 2010-06-02
The last revision was dated 2014-02-19, with a file datestamp of 2014-02-14.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: 0.215
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ethanolamine ammonia-lyase heavy chain
    Species: Escherichia coli [TaxId:83333]
    Gene: b2441, eutB, JW2434
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Ethanolamine ammonia-lyase light chain
    Species: Escherichia coli [TaxId:83333]
    Gene: b2440, eutC, JW2433
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Ethanolamine ammonia-lyase heavy chain
    Species: Escherichia coli [TaxId:83333]
    Gene: b2441, eutB, JW2434
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Ethanolamine ammonia-lyase light chain
    Species: Escherichia coli [TaxId:83333]
    Gene: b2440, eutC, JW2433
    Database cross-references and differences (RAF-indexed):
  • Heterogens: COY, ETA, GOL, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >3absA (A:)
mklkttlfgnvyqfkdvkevlakanelrsgdvlagvaaassqervaakqvlsemtvadir
nnpviayeddcvtrliqddvnetaynqiknwsiselreyvlsdetsvddiaftrkgltse
vvaavakicsnadliygakkmpvikkanttigipgtfsarlqpndtrddvqsiaaqiyeg
lsfgvgdavigvnpvtddvenlsrvldtiygvidkfniptqgcvlahvttqieairrgap
gglifqsicgsekglkefgvelamldearavgaefnriagenclyfetgqgsalsaganf
gadqvtmearnyglarhydpfivntvvgfigpeylyndrqiiragledhfmgklsgismg
cdccytnhadadqnlnenlmillatagcnyimgmplgddimlnyqttafhdtatvrqlln
lrpspeferwlesmgimangrltkragdpslff

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3absB (B:)
mdqsshhhhhhmdqkqieeivrsvmasmgqaapapseakcattncaapvtsescaldlgs
aeakawigvenphradvltelrrstvarvctgragprprtqallrfladhsrskdtvlke
vpeewvkaqgllevrseisdknlyltrpdmgrrlcaeavealkaqcvanpdvqvvisdgl
stdaitvnyeeilpplmaglkqaglkvgtpffvrygrvkiedqigeilgakvvillvger
pglgqseslscyavysprmattveadrtcisnihqggtppveaaavivdlakrmleqkas
ginmtr

    Sequence, based on observed residues (ATOM records):
    >3absB (B:)
aldlgsaeakawigvenphradvltelrrstvarvctgragprprtqallrfladhsrsk
dtvlkevpeewvkaqgllevrseisdknlyltrpdmgrrlcaeavealkaqcvanpdvqv
visdglstdaitvnyeeilpplmaglkqaglkvgtpffvrygrvkiedqigeilgakvvi
llvgerpglgqseslscyavysprmattveadrtcisnihqggtppveaaavivdlakrm
leqkasginmtr

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >3absC (C:)
mklkttlfgnvyqfkdvkevlakanelrsgdvlagvaaassqervaakqvlsemtvadir
nnpviayeddcvtrliqddvnetaynqiknwsiselreyvlsdetsvddiaftrkgltse
vvaavakicsnadliygakkmpvikkanttigipgtfsarlqpndtrddvqsiaaqiyeg
lsfgvgdavigvnpvtddvenlsrvldtiygvidkfniptqgcvlahvttqieairrgap
gglifqsicgsekglkefgvelamldearavgaefnriagenclyfetgqgsalsaganf
gadqvtmearnyglarhydpfivntvvgfigpeylyndrqiiragledhfmgklsgismg
cdccytnhadadqnlnenlmillatagcnyimgmplgddimlnyqttafhdtatvrqlln
lrpspeferwlesmgimangrltkragdpslff

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3absD (D:)
mdqsshhhhhhmdqkqieeivrsvmasmgqaapapseakcattncaapvtsescaldlgs
aeakawigvenphradvltelrrstvarvctgragprprtqallrfladhsrskdtvlke
vpeewvkaqgllevrseisdknlyltrpdmgrrlcaeavealkaqcvanpdvqvvisdgl
stdaitvnyeeilpplmaglkqaglkvgtpffvrygrvkiedqigeilgakvvillvger
pglgqseslscyavysprmattveadrtcisnihqggtppveaaavivdlakrmleqkas
ginmtr

    Sequence, based on observed residues (ATOM records):
    >3absD (D:)
aldlgsaeakawigvenphradvltelrrstvarvctgragprprtqallrfladhsrsk
dtvlkevpeewvkaqgllevrseisdknlyltrpdmgrrlcaeavealkaqcvanpdvqv
visdglstdaitvnyeeilpplmaglkqaglkvgtpffvrygrvkiedqigeilgakvvi
llvgerpglgqseslscyavysprmattveadrtcisnihqggtppveaaavivdlakrm
leqkasginmtr