PDB entry 3a4u

View 3a4u on RCSB PDB site
Description: Crystal structure of MCFD2 in complex with carbohydrate recognition domain of ERGIC-53
Class: protein transport
Keywords: LECTIN, ERGIC, ER, GOLGI, TRANSPORT, Disulfide bond, Endoplasmic reticulum, ER-Golgi transport, Golgi apparatus, Membrane, Protein transport, Transmembrane, Disease mutation
Deposited on 2009-07-17, released 2010-01-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-02-16, with a file datestamp of 2011-02-11.
Experiment type: XRAY
Resolution: 1.84 Å
R-factor: 0.188
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein ERGIC-53
    Species: Homo sapiens [TaxId:9606]
    Gene: LMAN1, ERGIC53, F5F8D
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3a4ua_
  • Chain 'B':
    Compound: multiple coagulation factor deficiency protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: MCFD2, SDNSF
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CA, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3a4uA (A:)
dgvggdpavalphrrfeykysfkgphlvqsdgtvpfwahagnaipssdqirvapslksqr
gsvwtktkaafenwevevtfrvtgrgrigadglaiwyaenqglegpvfgsadlwngvgif
fdsfdndgkknnpaiviignngqihydhqndgasqalascqrdfrnkpypvrakityyqn
tltvminngftpdkndyefcakvenmiipaqghfgisaatggladdhdvlsfltfqltep
gkepptpdkeiseke

    Sequence, based on observed residues (ATOM records): (download) 
    >3a4uA (A:)
lphrrfeykysfkgphlvqsdgtvpfwahagnaipssdqirvapslksqrgsvwtktkaa
fenwevevtfrvtgrgrigadglaiwyaenqglegpvfgsadlwngvgiffdsfdndgkk
nnpaiviignngqihydhqndgasqalascqrdfrnkpypvrakityyqntltvminngf
tpdkndyefcakvenmiipaqghfgisaatggladdhdvlsfltfqlt

  • Chain 'B':
    No sequence available.