PDB entry 3a2x

View 3a2x on RCSB PDB site
Description: Peroxiredoxin (C50S) from Aeropyrum pernix K1 (acetate-bound form)
Class: Oxidoreductase
Keywords: peroxiredoxin, thioredoxin peroxidase, Antioxidant, Oxidoreductase, Redox-active center
Deposited on 2009-06-04, released 2009-10-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-01-22, with a file datestamp of 2014-01-17.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.198
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9L0 (0-End)
      • engineered (48)
    Domains in SCOPe 2.08: d3a2xa_
  • Chain 'B':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9L0 (0-End)
      • engineered (48)
    Domains in SCOPe 2.08: d3a2xb_
  • Chain 'C':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9L0 (0-End)
      • engineered (48)
    Domains in SCOPe 2.08: d3a2xc_
  • Chain 'D':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9L0 (0-End)
      • engineered (48)
    Domains in SCOPe 2.08: d3a2xd_
  • Chain 'E':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9L0 (0-End)
      • engineered (48)
    Domains in SCOPe 2.08: d3a2xe_
  • Chain 'F':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9L0 (0-End)
      • engineered (48)
    Domains in SCOPe 2.08: d3a2xf_
  • Chain 'G':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9L0 (0-End)
      • engineered (48)
    Domains in SCOPe 2.08: d3a2xg_
  • Chain 'H':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9L0 (0-End)
      • engineered (48)
    Domains in SCOPe 2.08: d3a2xh_
  • Chain 'I':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9L0 (0-End)
      • engineered (48)
    Domains in SCOPe 2.08: d3a2xi_
  • Chain 'J':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9L0 (0-End)
      • engineered (48)
    Domains in SCOPe 2.08: d3a2xj_
  • Heterogens: ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3a2xA (A:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yeearthlh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3a2xA (A:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yee
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3a2xB (B:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yeearthlh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3a2xB (B:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    ye
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3a2xC (C:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yeearthlh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3a2xC (C:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yeea
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3a2xD (D:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yeearthlh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3a2xD (D:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yee
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >3a2xE (E:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yeearthlh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3a2xE (E:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yee
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >3a2xF (F:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yeearthlh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3a2xF (F:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yeea
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >3a2xG (G:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yeearthlh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3a2xG (G:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yee
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >3a2xH (H:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yeearthlh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3a2xH (H:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yee
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >3a2xI (I:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yeearthlh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3a2xI (I:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yee
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >3a2xJ (J:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yeearthlh
    

    Sequence, based on observed residues (ATOM records): (download)
    >3a2xJ (J:)
    pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvsttefvsfarry
    edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
    thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
    geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
    yee