PDB entry 3a2h
View 3a2h on RCSB PDB site
Description: Crystal structure of the rat vitamin D receptor ligand binding domain complexed with TEI-9647 and a synthetic peptide containing the NR2 box of DRIP 205
Class: hormone receptor, transcription
Keywords: hormone/growth factor receptor, DNA-binding, Metal-binding, Nucleus, Phosphoprotein, Transcription, Transcription regulation, Zinc-finger, Activator, Receptor, HORMONE RECEPTOR
Deposited on
2009-05-20, released
2010-05-26
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-08-09, with a file datestamp of
2017-08-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.21
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Vitamin D3 receptor
Species: Rattus norvegicus [TaxId:10116]
Gene: Vdr, Nr1i1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3a2ha_ - Chain 'B':
Compound: Mediator of RNA polymerase II transcription subunit 1 peptide
Species: homo sapiens, synthetic [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Heterogens: TEJ, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3a2hA (A:)
gshmlkdslrpklseeqqhiiailldahhktydptyadfrdfrppvrmdgstgsvtldls
plsmlphladlvsysiqkvigfakmipgfrdltsddqivllkssaievimlrsnqsftmd
dmswdcgsqdykydvtdvskaghtlelieplikfqvglkklnlheeehvllmaicivspd
rpgvqdaklveaiqdrlsntlqtyircrhpppgshqlyakmiqkladlrslneehskqyr
slsfqpensmkltplvlevfgneis
Sequence, based on observed residues (ATOM records): (download)
>3a2hA (A:)
klseeqqhiiailldahhktydptyadfrdfrppvrplsmlphladlvsysiqkvigfak
mipgfrdltsddqivllkssaievimlrsnqsftmddmswdcgsqdykydvtdvskaght
lelieplikfqvglkklnlheeehvllmaicivspdrpgvqdaklveaiqdrlsntlqty
ircrhpppgshqlyakmiqkladlrslneehskqyrslsfqpensmkltplvlevfgne
- Chain 'B':
No sequence available.