PDB entry 3a1y

View 3a1y on RCSB PDB site
Description: the structure of archaeal ribosomal stalk p1/p0 complex
Deposited on 2009-04-25, released 2009-11-17
The last revision was dated 2017-10-11, with a file datestamp of 2017-10-06.
Experiment type: XRAY
Resolution: 2.13 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 50S ribosomal protein P1 (L12P)
    Species: Pyrococcus horikoshii [TaxId:53953]
    Gene: PH1998
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: 50S ribosomal protein P1 (L12P)
    Species: Pyrococcus horikoshii [TaxId:53953]
    Gene: PH1998
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: 50S ribosomal protein P1 (L12P)
    Species: Pyrococcus horikoshii [TaxId:53953]
    Gene: PH1998
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: 50S ribosomal protein P1 (L12P)
    Species: Pyrococcus horikoshii [TaxId:53953]
    Gene: PH1998
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: 50S ribosomal protein P1 (L12P)
    Species: Pyrococcus horikoshii [TaxId:53953]
    Gene: PH1998
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: 50S ribosomal protein P1 (L12P)
    Species: Pyrococcus horikoshii [TaxId:53953]
    Gene: PH1998
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Acidic ribosomal protein P0
    Species: Pyrococcus horikoshii [TaxId:53953]
    Gene: PH1999
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >3a1yA (A:)
meyvyaalllhsvgkeineenlkavlqaagvepeearikalvaalegvnideviekaa

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >3a1yB (B:)
meyvyaalllhsvgkeineenlkavlqaagvepeearikalvaalegvnideviekaa

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >3a1yC (C:)
meyvyaalllhsvgkeineenlkavlqaagvepeearikalvaalegvnideviekaa

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >3a1yD (D:)
meyvyaalllhsvgkeineenlkavlqaagvepeearikalvaalegvnideviekaa

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >3a1yE (E:)
meyvyaalllhsvgkeineenlkavlqaagvepeearikalvaalegvnideviekaa

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >3a1yF (F:)
meyvyaalllhsvgkeineenlkavlqaagvepeearikalvaalegvnideviekaa

  • Chain 'G':
    Sequence, based on SEQRES records:
    >3a1yG (G:)
mahvaewkkkeveelakliksypvialvdvssmpayplsqmrrlirenggllrvsrntli
elaikkaakelgkpeleklveyidrgagilvtnmnpfklykflqqnrqpapakpgavvpk
dvvvpagptplapgpivgqmqalgipariekgkvtiqkdttvlkagevitpelanilnal
giqplevgldvlavyedgivytpdvlaideqeyidmlqkaymhafnlavniayptpetie
aiiqkaflnaktvaieagyitketiqdiigraframlllaqqlp

    Sequence, based on observed residues (ATOM records):
    >3a1yG (G:)
mahvaewkkkeveelakliksypvialvdvssmpayplsqmrrlirenggllrvsrntli
elaikkaakelgkpeleklveyidrgagilvtnmnpfklykflqqnrqpqplevgldvla
vyedgivytpdvlaideqeyidmlqkaymhafnlavniayptpetieaiiqkaflnaktv
aieagyitketiqdiigraframlllaqqlp