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PDB entry 3UGO

View 3UGO on RCSB PDB site
Description: Crystal structure of RNA-polymerase sigma subunit domain 2 complexed with -10 promoter element ssDNA oligo (TACAAT)
Deposited on 2011-11-02, released 2011-12-07
The last revision was dated 2012-03-07, with a file datestamp of 2012-03-02.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.198
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA polymerase sigma factor
    Species: Thermus aquaticus [TaxId:271]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: 5'-d(*tp*gp*tp*ap*cp*ap*ap*tp*gp*gp*g)-3'
  • Chain 'C':
    Compound: 5'-d(*tp*gp*tp*ap*cp*ap*ap*tp*gp*gp*g)-3'
  • Heterogens: K, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.06, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3ugoA (A:)
    gphmtsdpvrqylheigqvplltleeeidlarkveegmeaikklseatgldqelirevvr
    akilgtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieanl
    rlvvsiakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraia
    dqartiripvhmvetinklsrtarqlqqelgrepsyeeiaeamgpgwdakrveetlkiaq
    epvsl
    

    Sequence, based on observed residues (ATOM records):
    >3ugoA (A:)
    tsdpvrqylheigqvplltleeeidlarkveegmeaikklseatgldqelirevvrakil
    gtariqkipglkekpdpktveevdgklkslpkelkrylhiaregeaarqhlieanlrlvv
    siakkytgrglsfldliqegnqgliravekfeykrrfkfstyatwwirqainraiadqar
    

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.