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PDB entry 3Q6R

View 3Q6R on RCSB PDB site
Description: Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with disordered HBGA type Lex
Deposited on 2011-01-03, released 2011-05-11
The last revision was dated 2011-11-02, with a file datestamp of 2011-10-28.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: 0.165
AEROSPACI score: 0.7 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: capsid protein
    Species: Norwalk virus [TaxId:11983]
    Gene: capsid protein
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: capsid protein
    Species: Norwalk virus [TaxId:11983]
    Gene: capsid protein
    Database cross-references and differences (RAF-indexed):
  • Heterogens: EDO, IMD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.06, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3q6rA (A:)
    gpgsskpftlpiltlgeltnsrfplpidvlytnpnesaivqcqngrctldgelqgttqll
    ptgicafrgkvtqqvqdehrgthwnmtvtnlngtpfdptedvpaplgtpdfsgqiygvis
    qrntntvpgegnlpanraheaviatyspkftpklgniqfstwetqdvssgqptkftpvgl
    asvdanshfdqwtlpsysgaltlnmnlapsvapvfpgecllffrsfiplkggygnpaidc
    lmpqewvqhlyqesapslsdvalvryvnpetgrtlfeaklhrngfltvarnsagpvvapt
    ngyfrfdswvnqfytlapm
    

    Sequence, based on observed residues (ATOM records):
    >3q6rA (A:)
    skpftlpiltlgeltnsrfplpidvlytnpnesaivqcqngrctldgelqgttqllptgi
    cafrgkvtqqvqdehrgthwnmtvtnlngtpfdptedvpaplgtpdfsgqiygvisqrnt
    ntvpgegnlpanraheaviatyspkftpklgniqfstwetqdvssgqptkftpvglasvd
    anshfdqwtlpsysgaltlnmnlapsvapvfpgecllffrsfiplkggygnpaidclmpq
    ewvqhlyqesapslsdvalvryvnpetgrtlfeaklhrngfltvarnsagpvvaptngyf
    rfdswvnqfytlapm
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3q6rB (B:)
    gpgsskpftlpiltlgeltnsrfplpidvlytnpnesaivqcqngrctldgelqgttqll
    ptgicafrgkvtqqvqdehrgthwnmtvtnlngtpfdptedvpaplgtpdfsgqiygvis
    qrntntvpgegnlpanraheaviatyspkftpklgniqfstwetqdvssgqptkftpvgl
    asvdanshfdqwtlpsysgaltlnmnlapsvapvfpgecllffrsfiplkggygnpaidc
    lmpqewvqhlyqesapslsdvalvryvnpetgrtlfeaklhrngfltvarnsagpvvapt
    ngyfrfdswvnqfytlapm
    

    Sequence, based on observed residues (ATOM records):
    >3q6rB (B:)
    skpftlpiltlgeltnsrfplpidvlytnpnesaivqcqngrctldgelqgttqllptgi
    cafrgkvtqqvqdegthwnmtvtnlngtpfdptedvpaplgtpdfsgqiygvisqrntlp
    anraheaviatyspkftpklgniqfstwetqdvssgqptkftpvglasvdanshfdqwtl
    psysgaltlnmnlapsvapvfpgecllffrsfiplkggygnpaidclmpqewvqhlyqes
    apslsdvalvryvnpetgrtlfeaklhrngfltvarnsagpvvaptngyfrfdswvnqfy
    tlapm