PDB entry 2zzk

View 2zzk on RCSB PDB site
Description: Crystal structure of tRNA wybutosine synthesizing enzyme TYW4
Deposited on 2009-02-17, released 2009-06-02
The last revision was dated 2009-06-02, with a file datestamp of 2009-05-29.
Experiment type: XRAY
Resolution: 2.71 Å
R-factor: 0.216
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Leucine carboxyl methyltransferase 2
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: PPM2, TYW4, YOL141W
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08282
      • see remark 999 (416)
  • Chain 'B':
    Compound: Leucine carboxyl methyltransferase 2
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: PPM2, TYW4, YOL141W
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08282
      • see remark 999 (416)
  • Heterogens: CIT, PG4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2zzkA (A:)
mknlttikqtnknvkqerrkkyadlaiqgtnnssiaskrsvellylpklssannfqmdkn
nklleyfkffvpkkikrspcinrgywlrlfairsrlnsiieqtpqdkkivvvnlgcgydp
lpfqlldtnniqsqqyhdrvsfididysdllkikieliktipelskiiglsedkdyvdds
nvdflttpkylarpcdlndskmfstllnecqlydpnvvkvfvaevslaymkpersdsiie
atskmenshfiileqlipkgpfepfskqmlahfkrndsplqsvlkyntiesqvqrfnklg
fayvnvgdmfqlwesadeatkkellkvepfdeleefhlfchhyvlchatnykefaftqgf
lfdrsiseinltvdedyqllececpinrkfgdvdvagndvfymggsnpyrvneilqlsih
ydkidmknievsssevpvarmchtfttisrnnqllliggrkaphqglsdnwifdmktrew
smikslshtrfrhsacslpdgnvlilggvtegpamllynvteeifkdvtpkdeffqnslv
saglefdpvskqgiilgggfmdqttvsdkaiifkydaenatepitvikklqhplfqrygs
qikyitprkllivggtspsglfdrtnsiisldplsetltsipisrriwedhslmlagfsl
vstsmgtihiigggatcygfgsvtnvglkliaiak

    Sequence, based on observed residues (ATOM records):
    >2zzkA (A:)
nvkqerrkkyadlaiqgtnnssiaskrsvellylpklssannfqmdknnklleyfkffvp
kkikrspcinrgywlrlfairsrlnsiieqtpqdkkivvvnlgcgydplpfqlldtnniq
sqqyhdrvsfididysdllkikieliktipelskiiglsedkdyvddsnvdflttpkyla
rpcdlndskmfstllnecqlydpnvvkvfvaevslaymkpersdsiieatskmenshfii
leqlipkgpfepfskqmlahfkrndsplqsvlkyntiesqvqrfnklgfayvnvgdmfql
wesadeatkkellkvepfdeleefhlfchhyvlchatnykefaftqgflfdrsiseinlt
vdedyqllececpinrkfgdvdvagndvfymggsnpyrvneilqlsihydkidmknievs
ssevpvarmchtfttisrnnqllliggrkaphqglsdnwifdmktrewsmikslshtrfr
hsacslpdgnvlilggvtegpamllynvteeifkdvtpkdeffqnslvsaglefdpvskq
giilgggfmdqttvsdkaiifkydaenatepitvikklqhplfqrygsqikyitprklli
vggtspsglfdrtnsiisldplsetltsipisrriwedhslmlagfslvstgtihiiggg
atcygfgsvtnvglkliaia

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2zzkB (B:)
mknlttikqtnknvkqerrkkyadlaiqgtnnssiaskrsvellylpklssannfqmdkn
nklleyfkffvpkkikrspcinrgywlrlfairsrlnsiieqtpqdkkivvvnlgcgydp
lpfqlldtnniqsqqyhdrvsfididysdllkikieliktipelskiiglsedkdyvdds
nvdflttpkylarpcdlndskmfstllnecqlydpnvvkvfvaevslaymkpersdsiie
atskmenshfiileqlipkgpfepfskqmlahfkrndsplqsvlkyntiesqvqrfnklg
fayvnvgdmfqlwesadeatkkellkvepfdeleefhlfchhyvlchatnykefaftqgf
lfdrsiseinltvdedyqllececpinrkfgdvdvagndvfymggsnpyrvneilqlsih
ydkidmknievsssevpvarmchtfttisrnnqllliggrkaphqglsdnwifdmktrew
smikslshtrfrhsacslpdgnvlilggvtegpamllynvteeifkdvtpkdeffqnslv
saglefdpvskqgiilgggfmdqttvsdkaiifkydaenatepitvikklqhplfqrygs
qikyitprkllivggtspsglfdrtnsiisldplsetltsipisrriwedhslmlagfsl
vstsmgtihiigggatcygfgsvtnvglkliaiak

    Sequence, based on observed residues (ATOM records):
    >2zzkB (B:)
nknvkqerrkkyadlaiqgtnnssiaskrsvellylpklssannfqmdknnklleyfkff
vpkkikrspcinrgywlrlfairsrlnsiieqtpqdkkivvvnlgcgydplpfqlldtnn
iqsqqyhdrvsfididysdllkikeliktipelskiiglsvddsnvdflttpkylarpcd
lndskmfstllnecqlydpnvvkvfvaevslaymkpersdsiieatskmenshfiileql
ipkgpfepfskqmlahfkrndsplqsvlkyntiesqvqrfnklgfayvnvgdmfqlwesa
deatkkellkvepfdeleefhlfchhyvlchatnykefaftqgflfdrsiseinltvded
yqllececpinrkfgdvdvagndvfymggsnpyrvneilqlsihydkidmknievsssev
pvarmchtfttisrnnqllliggrkaphqglsdnwifdmktrewsmikslshtrfrhsac
slpdgnvlilggvtegpamllynvteeifkdvtpkdeffqnslvsaglefdpvskqgiil
gggfmdqttvsdkaiifkydaenatepitvikklqhplfqrygsqikyitprkllivggt
spsglfdrtnsiisldplsetltsipisrriwedhslmlagfslvstsmtihiigggatc
ygfgsvtnvglkliaia