PDB entry 2zyk

View 2zyk on RCSB PDB site
Description: Crystal structure of cyclo/maltodextrin-binding protein complexed with gamma-cyclodextrin
Class: sugar binding protein
Keywords: solute-binding protein, closed form, SUGAR BINDING PROTEIN
Deposited on 2009-01-26, released 2009-02-10
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-06-02, with a file datestamp of 2009-05-29.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.222
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Solute-binding protein
    Species: Thermoactinomyces vulgaris [TaxId:2026]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2zyka_
  • Chain 'B':
    Compound: Solute-binding protein
    Species: Thermoactinomyces vulgaris [TaxId:2026]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2zykb_
  • Chain 'C':
    Compound: Solute-binding protein
    Species: Thermoactinomyces vulgaris [TaxId:2026]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2zykc_
  • Chain 'D':
    Compound: Solute-binding protein
    Species: Thermoactinomyces vulgaris [TaxId:2026]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2zykd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2zykA (A:)
cgpkrdpyakagksegkpdklvvwenaddgvqlnntkkwageftkktgiqvevvpvallk
qqekltldgpagkgadlvtwphdrlgeavtkgllqpiqvdnsvknqfddvamkaltyggk
lyglpkaiesvaliynkklmgqvpatydelfqyakannkpdeqkygvlfeannfyytyfl
faakgaavfkeqdgtldpneiglnspeavqgmnevqkwftearlpqslkadtvnglfksg
kvaavingpwaikdyqaaginvgvaplpkidgkdaqtfigvkgwylsayskypkyatelm
qfltskealasrfketgeippqkellndpmiknnpvvngfakqaskgvpmpsipemgvvw
epinnahtfvaqgkqtpeqalndavkimkekiqtmkq

    Sequence, based on observed residues (ATOM records): (download) 
    >2zykA (A:)
kpdklvvwenaddgvqlnntkkwageftkktgiqvevvpvallkqqekltldgpagkgad
lvtwphdrlgeavtkgllqpiqvdnsvknqfddvamkaltyggklyglpkaiesvaliyn
kklmgqvpatydelfqyakannkpdeqkygvlfeannfyytyflfaakgaavfkeqdgtl
dpneiglnspeavqgmnevqkwftearlpqslkadtvnglfksgkvaavingpwaikdyq
aaginvgvaplpkidgkdaqtfigvkgwylsayskypkyatelmqfltskealasrfket
geippqkellndpmiknnpvvngfakqaskgvpmpsipemgvvwepinnahtfvaqgkqt
peqalndavkimkekiqtmkq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2zykB (B:)
cgpkrdpyakagksegkpdklvvwenaddgvqlnntkkwageftkktgiqvevvpvallk
qqekltldgpagkgadlvtwphdrlgeavtkgllqpiqvdnsvknqfddvamkaltyggk
lyglpkaiesvaliynkklmgqvpatydelfqyakannkpdeqkygvlfeannfyytyfl
faakgaavfkeqdgtldpneiglnspeavqgmnevqkwftearlpqslkadtvnglfksg
kvaavingpwaikdyqaaginvgvaplpkidgkdaqtfigvkgwylsayskypkyatelm
qfltskealasrfketgeippqkellndpmiknnpvvngfakqaskgvpmpsipemgvvw
epinnahtfvaqgkqtpeqalndavkimkekiqtmkq

    Sequence, based on observed residues (ATOM records): (download) 
    >2zykB (B:)
kpdklvvwenaddgvqlnntkkwageftkktgiqvevvpvallkqqekltldgpagkgad
lvtwphdrlgeavtkgllqpiqvdnsvknqfddvamkaltyggklyglpkaiesvaliyn
kklmgqvpatydelfqyakannkpdeqkygvlfeannfyytyflfaakgaavfkeqdgtl
dpneiglnspeavqgmnevqkwftearlpqslkadtvnglfksgkvaavingpwaikdyq
aaginvgvaplpkidgkdaqtfigvkgwylsayskypkyatelmqfltskealasrfket
geippqkellndpmiknnpvvngfakqaskgvpmpsipemgvvwepinnahtfvaqgkqt
peqalndavkimkekiqtmkq

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2zykC (C:)
cgpkrdpyakagksegkpdklvvwenaddgvqlnntkkwageftkktgiqvevvpvallk
qqekltldgpagkgadlvtwphdrlgeavtkgllqpiqvdnsvknqfddvamkaltyggk
lyglpkaiesvaliynkklmgqvpatydelfqyakannkpdeqkygvlfeannfyytyfl
faakgaavfkeqdgtldpneiglnspeavqgmnevqkwftearlpqslkadtvnglfksg
kvaavingpwaikdyqaaginvgvaplpkidgkdaqtfigvkgwylsayskypkyatelm
qfltskealasrfketgeippqkellndpmiknnpvvngfakqaskgvpmpsipemgvvw
epinnahtfvaqgkqtpeqalndavkimkekiqtmkq

    Sequence, based on observed residues (ATOM records): (download) 
    >2zykC (C:)
kpdklvvwenaddgvqlnntkkwageftkktgiqvevvpvallkqqekltldgpagkgad
lvtwphdrlgeavtkgllqpiqvdnsvknqfddvamkaltyggklyglpkaiesvaliyn
kklmgqvpatydelfqyakannkpdeqkygvlfeannfyytyflfaakgaavfkeqdgtl
dpneiglnspeavqgmnevqkwftearlpqslkadtvnglfksgkvaavingpwaikdyq
aaginvgvaplpkidgkdaqtfigvkgwylsayskypkyatelmqfltskealasrfket
geippqkellndpmiknnpvvngfakqaskgvpmpsipemgvvwepinnahtfvaqgkqt
peqalndavkimkekiqtmkq

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2zykD (D:)
cgpkrdpyakagksegkpdklvvwenaddgvqlnntkkwageftkktgiqvevvpvallk
qqekltldgpagkgadlvtwphdrlgeavtkgllqpiqvdnsvknqfddvamkaltyggk
lyglpkaiesvaliynkklmgqvpatydelfqyakannkpdeqkygvlfeannfyytyfl
faakgaavfkeqdgtldpneiglnspeavqgmnevqkwftearlpqslkadtvnglfksg
kvaavingpwaikdyqaaginvgvaplpkidgkdaqtfigvkgwylsayskypkyatelm
qfltskealasrfketgeippqkellndpmiknnpvvngfakqaskgvpmpsipemgvvw
epinnahtfvaqgkqtpeqalndavkimkekiqtmkq

    Sequence, based on observed residues (ATOM records): (download) 
    >2zykD (D:)
kpdklvvwenaddgvqlnntkkwageftkktgiqvevvpvallkqqekltldgpagkgad
lvtwphdrlgeavtkgllqpiqvdnsvknqfddvamkaltyggklyglpkaiesvaliyn
kklmgqvpatydelfqyakannkpdeqkygvlfeannfyytyflfaakgaavfkeqdgtl
dpneiglnspeavqgmnevqkwftearlpqslkadtvnglfksgkvaavingpwaikdyq
aaginvgvaplpkidgkdaqtfigvkgwylsayskypkyatelmqfltskealasrfket
geippqkellndpmiknnpvvngfakqaskgvpmpsipemgvvwepinnahtfvaqgkqt
peqalndavkimkekiqtmkq