PDB entry 2zy3

View 2zy3 on RCSB PDB site
Description: dodecameric l-aspartate beta-decarboxylase
Deposited on 2009-01-13, released 2009-01-27
The last revision was dated 2017-10-11, with a file datestamp of 2017-10-06.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: L-aspartate beta-decarboxylase
    Species: Alcaligenes faecalis subsp. faecalis [TaxId:32001]
    Gene: asdA-AF
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: L-aspartate beta-decarboxylase
    Species: Alcaligenes faecalis subsp. faecalis [TaxId:32001]
    Gene: asdA-AF
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: L-aspartate beta-decarboxylase
    Species: Alcaligenes faecalis subsp. faecalis [TaxId:32001]
    Gene: asdA-AF
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: L-aspartate beta-decarboxylase
    Species: Alcaligenes faecalis subsp. faecalis [TaxId:32001]
    Gene: asdA-AF
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q93QX0 (Start-532)
      • expression tag (533-534)
  • Chain 'E':
    Compound: L-aspartate beta-decarboxylase
    Species: Alcaligenes faecalis subsp. faecalis [TaxId:32001]
    Gene: asdA-AF
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: L-aspartate beta-decarboxylase
    Species: Alcaligenes faecalis subsp. faecalis [TaxId:32001]
    Gene: asdA-AF
    Database cross-references and differences (RAF-indexed):
  • Heterogens: PLP, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2zy3A (A:)
mskdyqslaklspfelkdelikiassdgnrlmlnagrgnpnflattprraffrlglfaaa
eselsysymttvgvgglakidgiegrferyiaenrdqegvrflgkslsyvrdqlgldpaa
flhemvdgilgcnypvpprmlnisekivrqyiiremgadaipsesvnlfaveggtaamay
ifeslklngllkagdkvaigmpvftpyieipelaqyaleevainadpslnwqypdseldk
lkdpaikiffcvnpsnppsvkmdqrslervrnivaehrpdlmiltddvygtfaddfqslf
aicpentllvysfskyfgatgwrlgvvaahqqnvfdlaldklqesekvaldhryrsllpd
vrslkfidrlvadsravalnhtaglstpqqvqmalfslfalmdeadeykhtlkqlirrre
ttlyrelgmpplrdenavdyytlidlqdvtaklygeafsewavkqsstgdmlfriadetg
ivllpgrgfgsnrpsgraslanlneyeyaaigralrkmadelyaeysgqaqnlklaaale
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >2zy3A (A:)
elikiassdgnrlmlnagrgnpnflattprraffrlglfaaaeselsysymttvgvggla
kidgiegrferyiaenrdqegvrflgkslsyvrdqlgldpaaflhemvdgilgcnypvpp
rmlnisekivrqyiiremgadaipsesvnlfaveggtaamayifeslklngllkagdkva
igmpvftpyieipelaqyaleevainadpslnwqypdseldklkdpaikiffcvnpsnpp
svkmdqrslervrnivaehrpdlmiltddvygtfaddfqslfaicpentllvysfskyfg
atgwrlgvvaahqqnvfdlaldklqesekvaldhryrsllpdvrslkfidrlvadsrava
lnhtaglstpqqvqmalfslfalmdeadeykhtlkqlirrrettlyrelgmpplrdenav
dyytlidlqdvtaklygeafsewavkqsstgdmlfriadetgivllpgrgfgsnrpsgra
slanlneyeyaaigralrkmadelyaeysg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2zy3B (B:)
mskdyqslaklspfelkdelikiassdgnrlmlnagrgnpnflattprraffrlglfaaa
eselsysymttvgvgglakidgiegrferyiaenrdqegvrflgkslsyvrdqlgldpaa
flhemvdgilgcnypvpprmlnisekivrqyiiremgadaipsesvnlfaveggtaamay
ifeslklngllkagdkvaigmpvftpyieipelaqyaleevainadpslnwqypdseldk
lkdpaikiffcvnpsnppsvkmdqrslervrnivaehrpdlmiltddvygtfaddfqslf
aicpentllvysfskyfgatgwrlgvvaahqqnvfdlaldklqesekvaldhryrsllpd
vrslkfidrlvadsravalnhtaglstpqqvqmalfslfalmdeadeykhtlkqlirrre
ttlyrelgmpplrdenavdyytlidlqdvtaklygeafsewavkqsstgdmlfriadetg
ivllpgrgfgsnrpsgraslanlneyeyaaigralrkmadelyaeysgqaqnlklaaale
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >2zy3B (B:)
elkdelikiassdgnrlmlnagrgnpnflattprraffrlglfaaaeselsysymttvgv
gglakidgiegrferyiaenrdqegvrflgkslsyvrdqlgldpaaflhemvdgilgcny
pvpprmlnisekivrqyiiremgadaipsesvnlfaveggtaamayifeslklngllkag
dkvaigmpvftpyieipelaqyaleevainadpslnwqypdseldklkdpaikiffcvnp
snppsvkmdqrslervrnivaehrpdlmiltddvygtfaddfqslfaicpentllvysfs
kyfgatgwrlgvvaahqqnvfdlaldklqesekvaldhryrsllpdvrslkfidrlvads
ravalnhtaglstpqqvqmalfslfalmdeadeykhtlkqlirrrettlyrelgmpplrd
enavdyytlidlqdvtaklygeafsewavkqsstgdmlfriadetgivllpgrgfgsnrp
sgraslanlneyeyaaigralrkmadelyaeysgq

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2zy3C (C:)
mskdyqslaklspfelkdelikiassdgnrlmlnagrgnpnflattprraffrlglfaaa
eselsysymttvgvgglakidgiegrferyiaenrdqegvrflgkslsyvrdqlgldpaa
flhemvdgilgcnypvpprmlnisekivrqyiiremgadaipsesvnlfaveggtaamay
ifeslklngllkagdkvaigmpvftpyieipelaqyaleevainadpslnwqypdseldk
lkdpaikiffcvnpsnppsvkmdqrslervrnivaehrpdlmiltddvygtfaddfqslf
aicpentllvysfskyfgatgwrlgvvaahqqnvfdlaldklqesekvaldhryrsllpd
vrslkfidrlvadsravalnhtaglstpqqvqmalfslfalmdeadeykhtlkqlirrre
ttlyrelgmpplrdenavdyytlidlqdvtaklygeafsewavkqsstgdmlfriadetg
ivllpgrgfgsnrpsgraslanlneyeyaaigralrkmadelyaeysgqaqnlklaaale
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >2zy3C (C:)
felkdelikiassdgnrlmlnagrgnpnflattprraffrlglfaaaeselsysymttvg
vgglakidgiegrferyiaenrdqegvrflgkslsyvrdqlgldpaaflhemvdgilgcn
ypvpprmlnisekivrqyiiremgadaipsesvnlfaveggtaamayifeslklngllka
gdkvaigmpvftpyieipelaqyaleevainadpslnwqypdseldklkdpaikiffcvn
psnppsvkmdqrslervrnivaehrpdlmiltddvygtfaddfqslfaicpentllvysf
skyfgatgwrlgvvaahqqnvfdlaldklqesekvaldhryrsllpdvrslkfidrlvad
sravalnhtaglstpqqvqmalfslfalmdeadeykhtlkqlirrrettlyrelgmpplr
denavdyytlidlqdvtaklygeafsewavkqsstgdmlfriadetgivllpgrgfgsnr
psgraslanlneyeyaaigralrkmadelyaeysgq

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2zy3D (D:)
mskdyqslaklspfelkdelikiassdgnrlmlnagrgnpnflattprraffrlglfaaa
eselsysymttvgvgglakidgiegrferyiaenrdqegvrflgkslsyvrdqlgldpaa
flhemvdgilgcnypvpprmlnisekivrqyiiremgadaipsesvnlfaveggtaamay
ifeslklngllkagdkvaigmpvftpyieipelaqyaleevainadpslnwqypdseldk
lkdpaikiffcvnpsnppsvkmdqrslervrnivaehrpdlmiltddvygtfaddfqslf
aicpentllvysfskyfgatgwrlgvvaahqqnvfdlaldklqesekvaldhryrsllpd
vrslkfidrlvadsravalnhtaglstpqqvqmalfslfalmdeadeykhtlkqlirrre
ttlyrelgmpplrdenavdyytlidlqdvtaklygeafsewavkqsstgdmlfriadetg
ivllpgrgfgsnrpsgraslanlneyeyaaigralrkmadelyaeysgqaqnlklaaale
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >2zy3D (D:)
kiassdgnrlmlnagrgnpnflattprraffrlglfaaaeselsysymttvgvgglakid
giegrferyiaenrdqegvrflgkslsyvrdqlgldpaaflhemvdgilgcnypvpprml
nisekivrqyiiremgadaipsesvnlfaveggtaamayifeslklngllkagdkvaigm
pvftpyieipelaqyaleevainadpslnwqypdseldklkdpaikiffcvnpsnppsvk
mdqrslervrnivaehrpdlmiltddvygtfaddfqslfaicpentllvysfskyfgatg
wrlgvvaahqqnvfdlaldklqesekvaldhryrsllpdvrslkfidrlvadsravalnh
taglstpqqvqmalfslfalmdeadeykhtlkqlirrrettlyrelgmpplrdenavdyy
tlidlqdvtaklygeafsewavkqsstgdmlfriadetgivllpgrgfgsnrpsgrasla
nlneyeyaaigralrkmadelyaeysgqaqnlkl

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2zy3E (E:)
mskdyqslaklspfelkdelikiassdgnrlmlnagrgnpnflattprraffrlglfaaa
eselsysymttvgvgglakidgiegrferyiaenrdqegvrflgkslsyvrdqlgldpaa
flhemvdgilgcnypvpprmlnisekivrqyiiremgadaipsesvnlfaveggtaamay
ifeslklngllkagdkvaigmpvftpyieipelaqyaleevainadpslnwqypdseldk
lkdpaikiffcvnpsnppsvkmdqrslervrnivaehrpdlmiltddvygtfaddfqslf
aicpentllvysfskyfgatgwrlgvvaahqqnvfdlaldklqesekvaldhryrsllpd
vrslkfidrlvadsravalnhtaglstpqqvqmalfslfalmdeadeykhtlkqlirrre
ttlyrelgmpplrdenavdyytlidlqdvtaklygeafsewavkqsstgdmlfriadetg
ivllpgrgfgsnrpsgraslanlneyeyaaigralrkmadelyaeysgqaqnlklaaale
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >2zy3E (E:)
kdelikiassdgnrlmlnagrgnpnflattprraffrlglfaaaeselsysymttvgvgg
lakidgiegrferyiaenrdqegvrflgkslsyvrdqlgldpaaflhemvdgilgcnypv
pprmlnisekivrqyiiremgadaipsesvnlfaveggtaamayifeslklngllkagdk
vaigmpvftpyieipelaqyaleevainadpslnwqypdseldklkdpaikiffcvnpsn
ppsvkmdqrslervrnivaehrpdlmiltddvygtfaddfqslfaicpentllvysfsky
fgatgwrlgvvaahqqnvfdlaldklqesekvaldhryrsllpdvrslkfidrlvadsra
valnhtaglstpqqvqmalfslfalmdeadeykhtlkqlirrrettlyrelgmpplrden
avdyytlidlqdvtaklygeafsewavkqsstgdmlfriadetgivllpgrgfgsnrpsg
raslanlneyeyaaigralrkmadelyaeysg

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2zy3F (F:)
mskdyqslaklspfelkdelikiassdgnrlmlnagrgnpnflattprraffrlglfaaa
eselsysymttvgvgglakidgiegrferyiaenrdqegvrflgkslsyvrdqlgldpaa
flhemvdgilgcnypvpprmlnisekivrqyiiremgadaipsesvnlfaveggtaamay
ifeslklngllkagdkvaigmpvftpyieipelaqyaleevainadpslnwqypdseldk
lkdpaikiffcvnpsnppsvkmdqrslervrnivaehrpdlmiltddvygtfaddfqslf
aicpentllvysfskyfgatgwrlgvvaahqqnvfdlaldklqesekvaldhryrsllpd
vrslkfidrlvadsravalnhtaglstpqqvqmalfslfalmdeadeykhtlkqlirrre
ttlyrelgmpplrdenavdyytlidlqdvtaklygeafsewavkqsstgdmlfriadetg
ivllpgrgfgsnrpsgraslanlneyeyaaigralrkmadelyaeysgqaqnlklaaale
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >2zy3F (F:)
lspfelkdelikiassdgnrlmlnagrgnpnflattprraffrlglfaaaeselsysymt
tvgvgglakidgiegrferyiaenrdqegvrflgkslsyvrdqlgldpaaflhemvdgil
gcnypvpprmlnisekivrqyiiremgadaipsesvnlfaveggtaamayifeslklngl
lkagdkvaigmpvftpyieipelaqyaleevainadpslnwqypdseldklkdpaikiff
cvnpsnppsvkmdqrslervrnivaehrpdlmiltddvygtfaddfqslfaicpentllv
ysfskyfgatgwrlgvvaahqqnvfdlaldklqesekvaldhryrsllpdvrslkfidrl
vadsravalnhtaglstpqqvqmalfslfalmdeadeykhtlkqlirrrettlyrelgmp
plrdenavdyytlidlqdvtaklygeafsewavkqsstgdmlfriadetgivllpgrgfg
snrpsgraslanlneyeyaaigralrkmadelyaeysgqaqnl