PDB entry 2zxn
View 2zxn on RCSB PDB site
Description: A New Class of Vitamin D Receptor Ligands that Induce Structural Rearrangement of the Ligand-binding Pocket
Class: transcription
Keywords: Nuclear receptor-agonist complex, TRANSCRIPTION, DNA-binding, Metal-binding, Nucleus, Phosphoprotein, Receptor, Transcription regulation, Zinc, Zinc-finger, Activator
Deposited on
2009-01-04, released
2009-02-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-03-24, with a file datestamp of
2009-03-20.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.209
AEROSPACI score: 0.41
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Vitamin D3 receptor
Species: Rattus norvegicus [TaxId:10116]
Gene: Nr1i1, Vdr
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2zxna_ - Chain 'C':
Compound: Mediator of RNA polymerase II transcription subunit 1
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: JC1, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2zxnA (A:)
gshmgspnsplkdslrpklseeqqhiiailldahhktydptyadfrdfrppvrmdgstgs
vtldlsplsmlphladlvsysiqkvigfakmipgfrdltsddqivllkssaievimlrsn
qsftmddmswdcgsqdykydvtdvskaghtlelieplikfqvglkklnlheeehvllmai
civspdrpgvqdaklveaiqdrlsntlqtyircrhpppgshqlyakmiqkladlrslnee
hskqyrslsfqpensmkltplvlevfgneis
Sequence, based on observed residues (ATOM records): (download)
>2zxnA (A:)
klseeqqhiiailldahhktydptyadfrdfrppvrmsplsmlphladlvsysiqkvigf
akmipgfrdltsddqivllkssaievimlrsnqsftmddmswdcgsqdykydvtdvskag
htlelieplikfqvglkklnlheeehvllmaicivspdrpgvqdaklveaiqdrlsntlq
tyircrhpppgshqlyakmiqkladlrslneehskqyrslsfqpensmkltplvlevfgn
- Chain 'C':
No sequence available.