PDB entry 2zwa

View 2zwa on RCSB PDB site
Description: Crystal structure of tRNA wybutosine synthesizing enzyme TYW4
Deposited on 2008-12-01, released 2009-06-02
The last revision was dated 2009-06-02, with a file datestamp of 2009-05-29.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.174
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Leucine carboxyl methyltransferase 2
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: PPM2, TYW4, YOL141W
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08282
      • see remark 999 (416)
  • Chain 'B':
    Compound: Leucine carboxyl methyltransferase 2
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: PPM2, TYW4, YOL141W
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08282
      • see remark 999 (416)
  • Heterogens: SAH, CIT, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2zwaA (A:)
mknlttikqtnknvkqerrkkyadlaiqgtnnssiaskrsvellylpklssannfqmdkn
nklleyfkffvpkkikrspcinrgywlrlfairsrlnsiieqtpqdkkivvvnlgcgydp
lpfqlldtnniqsqqyhdrvsfididysdllkikieliktipelskiiglsedkdyvdds
nvdflttpkylarpcdlndskmfstllnecqlydpnvvkvfvaevslaymkpersdsiie
atskmenshfiileqlipkgpfepfskqmlahfkrndsplqsvlkyntiesqvqrfnklg
fayvnvgdmfqlwesadeatkkellkvepfdeleefhlfchhyvlchatnykefaftqgf
lfdrsiseinltvdedyqllececpinrkfgdvdvagndvfymggsnpyrvneilqlsih
ydkidmknievsssevpvarmchtfttisrnnqllliggrkaphqglsdnwifdmktrew
smikslshtrfrhsacslpdgnvlilggvtegpamllynvteeifkdvtpkdeffqnslv
saglefdpvskqgiilgggfmdqttvsdkaiifkydaenatepitvikklqhplfqrygs
qikyitprkllivggtspsglfdrtnsiisldplsetltsipisrriwedhslmlagfsl
vstsmgtihiigggatcygfgsvtnvglkliaiak

    Sequence, based on observed residues (ATOM records):
    >2zwaA (A:)
qerrkkyadlaiqgtnnssiaskrsvellylpklssannfqmdknnklleyfkffvpkki
krspcinrgywlrlfairsrlnsiieqtpqdkkivvvnlgcgydplpfqlldtnniqsqq
yhdrvsfididysdllkikieliktipelskiiglsedkdyvddsnvdflttpkylarpc
dlndskmfstllnecqlydpnvvkvfvaevslaymkpersdsiieatskmenshfiileq
lipkgpfepfskqmlahfkrndsplqsvlkyntiesqvqrfnklgfayvnvgdmfqlwes
adeatkkellkvepfdeleefhlfchhyvlchatnykefaftqgflfdrinltvdedyql
lececpinrkfgdvdvagndvfymggsnpyrvneilqlsihydkidmknievsssevpva
rmchtfttisrnnqllliggrkaphqglsdnwifdmktrewsmikslshtrfrhsacslp
dgnvlilggvtegpamllynvteeifkdvtpkdeffqnslvsaglefdpvskqgiilggg
fmdqttvsdkaiifkydaenatepitvikklqhplfqrygsqikyitprkllivggtsps
glfdrtnsiisldplsetltsipisrriwedhslmlagfslvsttihiigggatcygfgs
vtnvglkliaia

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2zwaB (B:)
mknlttikqtnknvkqerrkkyadlaiqgtnnssiaskrsvellylpklssannfqmdkn
nklleyfkffvpkkikrspcinrgywlrlfairsrlnsiieqtpqdkkivvvnlgcgydp
lpfqlldtnniqsqqyhdrvsfididysdllkikieliktipelskiiglsedkdyvdds
nvdflttpkylarpcdlndskmfstllnecqlydpnvvkvfvaevslaymkpersdsiie
atskmenshfiileqlipkgpfepfskqmlahfkrndsplqsvlkyntiesqvqrfnklg
fayvnvgdmfqlwesadeatkkellkvepfdeleefhlfchhyvlchatnykefaftqgf
lfdrsiseinltvdedyqllececpinrkfgdvdvagndvfymggsnpyrvneilqlsih
ydkidmknievsssevpvarmchtfttisrnnqllliggrkaphqglsdnwifdmktrew
smikslshtrfrhsacslpdgnvlilggvtegpamllynvteeifkdvtpkdeffqnslv
saglefdpvskqgiilgggfmdqttvsdkaiifkydaenatepitvikklqhplfqrygs
qikyitprkllivggtspsglfdrtnsiisldplsetltsipisrriwedhslmlagfsl
vstsmgtihiigggatcygfgsvtnvglkliaiak

    Sequence, based on observed residues (ATOM records):
    >2zwaB (B:)
lttikqtnknvkqerrkkyadlaiqgtnnssiaskrsvellylpklssannfqmdknnkl
leyfkffvpkkikrspcinrgywlrlfairsrlnsiieqtpqdkkivvvnlgcgydplpf
qlldtnniqsqqyhdrvsfididysdllkikieliktipelskiiglseyvddsnvdflt
tpkylarpcdlndskmfstllnecqlydpnvvkvfvaevslaymkpersdsiieatskme
nshfiileqlipkgpfepfskqmlahfkrndsplqsvlkyntiesqvqrfnklgfayvnv
gdmfqlwesadeatkkellkvepfdeleefhlfchhyvlchatnykefaftqgflfdrin
ltvdedyqllececpinrkfgdvdvagndvfymggsnpyrvneilqlsihydkidmknie
vsssevpvarmchtfttisrnnqllliggrkaphqglsdnwifdmktrewsmikslshtr
frhsacslpdgnvlilggvtegpamllynvteeifkdvtpkdeffqnslvsaglefdpvs
kqgiilgggfmdqttvsdkaiifkydaenatepitvikklqhplfqrygsqikyitprkl
livggtspsglfdrtnsiisldplsetltsipisrriwedhslmlagfslvstsmgtihi
igggatcygfgsvtnvglkliai