PDB entry 2zvi

View 2zvi on RCSB PDB site
Description: Crystal structure of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis
Class: isomerase
Keywords: CRYSTAL STRUCTURE, ENOLASE, METHIONINE SALVAGE PATHWAY, Amino-acid biosynthesis, Isomerase, Magnesium, Metal-binding, Methionine biosynthesis
Deposited on 2008-11-07, released 2009-09-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-09-01, with a file datestamp of 2009-08-28.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.201
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2zvia1, d2zvia2, d2zvia3
  • Chain 'B':
    Compound: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2zvib1, d2zvib2, d2zvib3
  • Chain 'C':
    Compound: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2zvic1, d2zvic2, d2zvic3
  • Chain 'D':
    Compound: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2zvid1, d2zvid2, d2zvid3
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2zviA (A:)
mgsshhhhhhssglvprgshmsellatylltepgadtekkaeqiatgltvgswtdlplvk
qeqmqkhkgrvikveeregtaasekqavitiaypeinfsqdipallttvfgklsldgkik
lidlhfseafkralpgpkfgvygirkllgeferpllmsifkgvigrdlsdikeqlrqqal
ggvdlikddeiffetglapfetriaegkqilketyeqtghktlyavnltgrtadlkdkar
raaelgadallfnvfaygldvmqglaedpeipvpimahpavsgaftsspfygfshalllg
klnrycgadfslfpspygsvalpradalaiheecvredafnqtfavpsagihpgmvpllm
rdfgidhiinagggvhghpngaqgggrafraiidavleaqpidekaeqckdlklaldkwg
kaeav

    Sequence, based on observed residues (ATOM records): (download) 
    >2zviA (A:)
sellatylltepdtekkaeqiatgltvgswtdlplvkqeqmqkhkgrvikveeraasekq
avitiaypeinfsqdipallttvfgklsldgkiklidlhfseafkralpgpkfgvygirk
llgeferpllmsifkgvigrdlsdikeqlrqqalggvdlikddeiffetglapfetriae
gkqilketyeqtghktlyavnltgrtadlkdkarraaelgadallfnvfaygldvmqgla
edpeipvpimahpavsgaftsspfygfshalllgklnrycgadfslfpspygsvalprad
alaiheecvredafnqtfavpsagihpgmvpllmrdfgidhiinagggvhghpngaqggg
rafraiidavleaqpidekaeqckdlklaldkwgk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2zviB (B:)
mgsshhhhhhssglvprgshmsellatylltepgadtekkaeqiatgltvgswtdlplvk
qeqmqkhkgrvikveeregtaasekqavitiaypeinfsqdipallttvfgklsldgkik
lidlhfseafkralpgpkfgvygirkllgeferpllmsifkgvigrdlsdikeqlrqqal
ggvdlikddeiffetglapfetriaegkqilketyeqtghktlyavnltgrtadlkdkar
raaelgadallfnvfaygldvmqglaedpeipvpimahpavsgaftsspfygfshalllg
klnrycgadfslfpspygsvalpradalaiheecvredafnqtfavpsagihpgmvpllm
rdfgidhiinagggvhghpngaqgggrafraiidavleaqpidekaeqckdlklaldkwg
kaeav

    Sequence, based on observed residues (ATOM records): (download) 
    >2zviB (B:)
sellatylltepgadtekkaeqiatgltvgswtdlplvkqeqmqkhkgrvikveersekq
avitiaypeinfsqdipallttvfgklsldgkiklidlhfseafkralpgpkfgvygirk
llgeferpllmsifkgvigrdlsdikeqlrqqalggvdlikddeiffetglapfetriae
gkqilketyeqtghktlyavnltgrtadlkdkarraaelgadallfnvfaygldvmqgla
edpeipvpimahpavsgaftsspfygfshalllgklnrycgadfslfpspygsvalprad
alaiheecvredafnqtfavpsagihpgmvpllmrdfgidhiinagggvhghpngaqggg
rafraiidavleaqpidekaeqckdlklaldkwgka

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2zviC (C:)
mgsshhhhhhssglvprgshmsellatylltepgadtekkaeqiatgltvgswtdlplvk
qeqmqkhkgrvikveeregtaasekqavitiaypeinfsqdipallttvfgklsldgkik
lidlhfseafkralpgpkfgvygirkllgeferpllmsifkgvigrdlsdikeqlrqqal
ggvdlikddeiffetglapfetriaegkqilketyeqtghktlyavnltgrtadlkdkar
raaelgadallfnvfaygldvmqglaedpeipvpimahpavsgaftsspfygfshalllg
klnrycgadfslfpspygsvalpradalaiheecvredafnqtfavpsagihpgmvpllm
rdfgidhiinagggvhghpngaqgggrafraiidavleaqpidekaeqckdlklaldkwg
kaeav

    Sequence, based on observed residues (ATOM records): (download) 
    >2zviC (C:)
sellatylltepgadtekkaeqiatgltvvkqeqmqkhkgrvikveerekqavitiaype
infsqdipallttvfgklsldgkiklidlhfseafkralpgpkfgvygirkllgeferpl
lmsifkgvigrdlsdikeqlrqqalggvdlikddeiffetglapfetriaegkqilkety
eqtghktlyavnltgrtadlkdkarraaelgadallfnvfaygldvmqglaedpeipvpi
mahpavsgaftsspfygfshalllgklnrycgadfslfpspygsvalpradalaiheecv
redafnqtfavpsagihpgmvpllmrdfgidhiinagggvhghpngaqgggrafraiida
vleaqpidekaeqckdlklaldkwg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2zviD (D:)
mgsshhhhhhssglvprgshmsellatylltepgadtekkaeqiatgltvgswtdlplvk
qeqmqkhkgrvikveeregtaasekqavitiaypeinfsqdipallttvfgklsldgkik
lidlhfseafkralpgpkfgvygirkllgeferpllmsifkgvigrdlsdikeqlrqqal
ggvdlikddeiffetglapfetriaegkqilketyeqtghktlyavnltgrtadlkdkar
raaelgadallfnvfaygldvmqglaedpeipvpimahpavsgaftsspfygfshalllg
klnrycgadfslfpspygsvalpradalaiheecvredafnqtfavpsagihpgmvpllm
rdfgidhiinagggvhghpngaqgggrafraiidavleaqpidekaeqckdlklaldkwg
kaeav

    Sequence, based on observed residues (ATOM records): (download) 
    >2zviD (D:)
sellatylltepgadtekkaeqiatgplvkqeqmqkhkgrvikveerekqavitiaypei
nfsqdipallttvfgklsldgkiklidlhfseafkralpgpkfgvygirkllgeferpll
msifkgvigrdlsdikeqlrqqalggvdlikddeiffetglapfetriaegkqilketye
qtghktlyavnltgrtadlkdkarraaelgadallfnvfaygldvmqglaedpeipvpim
ahpavsgaftsspfygfshalllgklnrycgadfslfpspygsvalpradalaiheecvr
edafnqtfavpsagihpgmvpllmrdfgidhiinagggvhghpngaqgggrafraiidav
leaqpidekaeqckdlklaldkwgkaea