PDB entry 2zv3
View 2zv3 on RCSB PDB site
Description: Crystal structure of project MJ0051 from Methanocaldococcus jannaschii DSM 2661
Class: hydrolase
Keywords: Cytoplasm, Hydrolase, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI
Deposited on
2008-10-31, released
2009-05-05
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-05-05, with a file datestamp of
2009-05-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.218
AEROSPACI score: 0.4
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Peptidyl-tRNA hydrolase
Species: Methanocaldococcus jannaschii [TaxId:243232]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2zv3a_ - Chain 'B':
Compound: Peptidyl-tRNA hydrolase
Species: Methanocaldococcus jannaschii [TaxId:243232]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2zv3b_ - Chain 'C':
Compound: Peptidyl-tRNA hydrolase
Species: Methanocaldococcus jannaschii [TaxId:243232]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2zv3c_ - Chain 'D':
Compound: Peptidyl-tRNA hydrolase
Species: Methanocaldococcus jannaschii [TaxId:243232]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2zv3d_ - Chain 'E':
Compound: Peptidyl-tRNA hydrolase
Species: Methanocaldococcus jannaschii [TaxId:243232]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2zv3e_ - Chain 'F':
Compound: Peptidyl-tRNA hydrolase
Species: Methanocaldococcus jannaschii [TaxId:243232]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2zv3f_ - Chain 'G':
Compound: Peptidyl-tRNA hydrolase
Species: Methanocaldococcus jannaschii [TaxId:243232]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2zv3g_ - Chain 'H':
Compound: Peptidyl-tRNA hydrolase
Species: Methanocaldococcus jannaschii [TaxId:243232]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2zv3h_ - Chain 'I':
Compound: Peptidyl-tRNA hydrolase
Species: Methanocaldococcus jannaschii [TaxId:243232]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2zv3i_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2zv3A (A:)
mkmvvvirndlgmgkgkmvaqgghaiieafldakrknpravdewlregqkkvvvkvnsek
elidiynkarseglpcsiirdaghtqlepgtltavaigpekdekidkitghlkll
Sequence, based on observed residues (ATOM records): (download)
>2zv3A (A:)
mkmvvvirndlgmgkgkmvaqgghaiieafldakrknpravdewlregqkkvvvkvnsek
elidiynkarseglpcsiirdagtltavaigpekdekidkitghlkll
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2zv3B (B:)
mkmvvvirndlgmgkgkmvaqgghaiieafldakrknpravdewlregqkkvvvkvnsek
elidiynkarseglpcsiirdaghtqlepgtltavaigpekdekidkitghlkll
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2zv3C (C:)
mkmvvvirndlgmgkgkmvaqgghaiieafldakrknpravdewlregqkkvvvkvnsek
elidiynkarseglpcsiirdaghtqlepgtltavaigpekdekidkitghlkll
Sequence, based on observed residues (ATOM records): (download)
>2zv3C (C:)
mkmvvvirndlgmgkgkmvaqgghaiieafldakrknpravdewlregqkkvvvkvnsek
elidiynkarseglpcsiirdaghpgtltavaigpekdekidkitghlkll
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>2zv3D (D:)
mkmvvvirndlgmgkgkmvaqgghaiieafldakrknpravdewlregqkkvvvkvnsek
elidiynkarseglpcsiirdaghtqlepgtltavaigpekdekidkitghlkll
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>2zv3E (E:)
mkmvvvirndlgmgkgkmvaqgghaiieafldakrknpravdewlregqkkvvvkvnsek
elidiynkarseglpcsiirdaghtqlepgtltavaigpekdekidkitghlkll
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>2zv3F (F:)
mkmvvvirndlgmgkgkmvaqgghaiieafldakrknpravdewlregqkkvvvkvnsek
elidiynkarseglpcsiirdaghtqlepgtltavaigpekdekidkitghlkll
- Chain 'G':
Sequence, based on SEQRES records: (download)
>2zv3G (G:)
mkmvvvirndlgmgkgkmvaqgghaiieafldakrknpravdewlregqkkvvvkvnsek
elidiynkarseglpcsiirdaghtqlepgtltavaigpekdekidkitghlkll
Sequence, based on observed residues (ATOM records): (download)
>2zv3G (G:)
mkmvvvirndlgmgkgkmvaqgghaiieafldakrknpravdewlregqkkvvvkvnsek
elidiynkarseglpcsiirdagpgtltavaigpekdekidkitghlkll
- Chain 'H':
Sequence, based on SEQRES records: (download)
>2zv3H (H:)
mkmvvvirndlgmgkgkmvaqgghaiieafldakrknpravdewlregqkkvvvkvnsek
elidiynkarseglpcsiirdaghtqlepgtltavaigpekdekidkitghlkll
Sequence, based on observed residues (ATOM records): (download)
>2zv3H (H:)
mkmvvvirndlgmgkgkmvaqgghaiieafldakrkavdewlregqkkvvvkvnsekeli
diynkarseglpcsiirdaghtqlepgtltavaigpeghlkll
- Chain 'I':
Sequence, based on SEQRES records: (download)
>2zv3I (I:)
mkmvvvirndlgmgkgkmvaqgghaiieafldakrknpravdewlregqkkvvvkvnsek
elidiynkarseglpcsiirdaghtqlepgtltavaigpekdekidkitghlkll
Sequence, based on observed residues (ATOM records): (download)
>2zv3I (I:)
mkmvvvirndlgmgkgkmvaqgghaiieafldakrknpravdewlregqkkvvvkvnsek
elidiynkarseglpcsiirdagqlepgtltavaigpekdekidkitghlkll