PDB entry 2zua
View 2zua on RCSB PDB site
Description: Crystal structure of nucleoside diphosphate kinase from Haloarcula quadrata
Class: transferase
Keywords: ferredoxin fold, Kpn loop, transferase, Kinase
Deposited on
2008-10-15, released
2009-08-25
The last revision prior to the SCOPe 2.03 freeze date was dated
2009-08-25, with a file datestamp of
2009-08-21.
Experiment type: XRAY
Resolution: 2.59 Å
R-factor: 0.225
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Nucleoside diphosphate kinase
Species: Haloarcula quadrata [TaxId:182779]
Gene: ndk
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2zuaa_ - Chain 'B':
Compound: Nucleoside diphosphate kinase
Species: Haloarcula quadrata [TaxId:182779]
Gene: ndk
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2zuab_ - Chain 'C':
Compound: Nucleoside diphosphate kinase
Species: Haloarcula quadrata [TaxId:182779]
Gene: ndk
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2zuac_ - Chain 'D':
Compound: Nucleoside diphosphate kinase
Species: Haloarcula quadrata [TaxId:182779]
Gene: ndk
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2zuad_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2zuaA (A:)
mgsshhhhhhssglvprgshmsehertfvmvkpdgvqrgligdivsrfedrglkmvggkf
mqidqelaeehygehedkpffdglvdfitsgpvfamvwegqdatrqvrtmmgetdpaesa
pgtirgdygldlgrnvihgsdhedeganereielffdedelvdwdqidsswlye
Sequence, based on observed residues (ATOM records): (download)
>2zuaA (A:)
sehertfvmvkpdgvqrgligdivsrfedrglkmvggkfmqidqelaeehygehedkpff
dglvdfitsgpvfamvwegqdatrqvrtmmgetdpaesapgtirgdygldlgrnvihgsd
hedeganereielffdedelvdwdqidsswlye
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2zuaB (B:)
mgsshhhhhhssglvprgshmsehertfvmvkpdgvqrgligdivsrfedrglkmvggkf
mqidqelaeehygehedkpffdglvdfitsgpvfamvwegqdatrqvrtmmgetdpaesa
pgtirgdygldlgrnvihgsdhedeganereielffdedelvdwdqidsswlye
Sequence, based on observed residues (ATOM records): (download)
>2zuaB (B:)
ehertfvmvkpdgvqrgligdivsrfedrglkmvggkfmqidqelaeehygehedkpffd
glvdfitsgpvfamvwegqdatrqvrtmmgetdpaesapgtirgdygldlgrnvihgsdh
edeganereielffdedelvdwdqidsswlye
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2zuaC (C:)
mgsshhhhhhssglvprgshmsehertfvmvkpdgvqrgligdivsrfedrglkmvggkf
mqidqelaeehygehedkpffdglvdfitsgpvfamvwegqdatrqvrtmmgetdpaesa
pgtirgdygldlgrnvihgsdhedeganereielffdedelvdwdqidsswlye
Sequence, based on observed residues (ATOM records): (download)
>2zuaC (C:)
sehertfvmvkpdgvqrgligdivsrfedrglkmvggkfmqidqelaeehygehedkpff
dglvdfitsgpvfamvwegqdatrqvrtmmgetdpaesapgtirgdygldlgrnvihgsd
hedeganereielffdedelvdwdqidsswlye
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2zuaD (D:)
mgsshhhhhhssglvprgshmsehertfvmvkpdgvqrgligdivsrfedrglkmvggkf
mqidqelaeehygehedkpffdglvdfitsgpvfamvwegqdatrqvrtmmgetdpaesa
pgtirgdygldlgrnvihgsdhedeganereielffdedelvdwdqidsswlye
Sequence, based on observed residues (ATOM records): (download)
>2zuaD (D:)
sehertfvmvkpdgvqrgligdivsrfedrglkmvggkfmqidqelaeehygehedkpff
dglvdfitsgpvfamvwegqdatrqvrtmmgetdpaesapgtirgdygldlgrnvihgsd
hedeganereielffdedelvdwdqidsswlye