PDB entry 2zsm

View 2zsm on RCSB PDB site
Description: Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from Aeropyrum pernix, hexagonal form
Class: isomerase
Keywords: PLP dependent enzyme, GSA, Cytoplasm, Isomerase, Porphyrin biosynthesis, Pyridoxal phosphate
Deposited on 2008-09-17, released 2008-10-21
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.176
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate-1-semialdehyde 2,1-aminomutase
    Species: Aeropyrum pernix [TaxId:56636]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9I9 (6-433)
      • expression tag (3-5)
    Domains in SCOPe 2.03: d2zsma_
  • Chain 'B':
    Compound: Glutamate-1-semialdehyde 2,1-aminomutase
    Species: Aeropyrum pernix [TaxId:56636]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2zsmb_
  • Chain 'C':
    Compound: Glutamate-1-semialdehyde 2,1-aminomutase
    Species: Aeropyrum pernix [TaxId:56636]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2zsmc_
  • Heterogens: PMP, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2zsmA (A:)
ghmdvlasgeksrmlfertkelfpggvnspvraavkpypfyvkrgegaylytvdgarivd
lvlaygplilghkhprvleaveealargwlygapgeaevllaekilgyvkrggmirfvns
gteatmtairlargytgrdlilkfdgcyhgshdavlvaagsaaahygvptsagvpeavar
ltlvtpyndvealervfaeygdriagvivepvianagvipprreflaalqrlsresgall
ildevvtgfrlglegaqgyfniegdiivlgkiigggfpvgavagsrevmslltpqgkvfn
agtfnahpitmaaglatlkaleeepvysvsreaakaleeaasevldrtglpytinrvesm
mqlfigveevsnaaqarkadkkfyvklheemlrrgvfiapsnleavftglphqgealeia
veglrsslktvlgs

    Sequence, based on observed residues (ATOM records): (download) 
    >2zsmA (A:)
dvlasgeksrmlfertkelfpggvnspvraavkpypfyvkrgegaylytvdgarivdlvl
aygplilghkhprvleaveealargwlygapgeaevllaekilgyvkrggmirfvnsgte
atmtairlargytgrdlilkfdgcyhgshdavlvaaggvptsagvpeavarltlvtpynd
vealervfaeygdriagvivepvianagvipprreflaalqrlsresgallildevvtgf
rlglegaqgyfniegdiivlgkiigggfpvgavagsrevmslltpqgkvfnagtfnahpi
tmaaglatlkaleeepvysvsreaakaleeaasevldrtglpytinrvesmmqlfigvee
vsnaaqarkadkkfyvklheemlrrgvfiapsnleavftglphqgealeiaveglrsslk
tvlgs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2zsmB (B:)
ghmdvlasgeksrmlfertkelfpggvnspvraavkpypfyvkrgegaylytvdgarivd
lvlaygplilghkhprvleaveealargwlygapgeaevllaekilgyvkrggmirfvns
gteatmtairlargytgrdlilkfdgcyhgshdavlvaagsaaahygvptsagvpeavar
ltlvtpyndvealervfaeygdriagvivepvianagvipprreflaalqrlsresgall
ildevvtgfrlglegaqgyfniegdiivlgkiigggfpvgavagsrevmslltpqgkvfn
agtfnahpitmaaglatlkaleeepvysvsreaakaleeaasevldrtglpytinrvesm
mqlfigveevsnaaqarkadkkfyvklheemlrrgvfiapsnleavftglphqgealeia
veglrsslktvlgs

    Sequence, based on observed residues (ATOM records): (download) 
    >2zsmB (B:)
eksrmlfertkelfpggvnspvraavkpypfyvkrgegaylytvdgarivdlvlaygpli
lghkhprvleaveealargwlygapgeaevllaekilgyvkrggmirfvnsgteatmtai
rlargytgrdlilkfdgcyhgshdavlvaaggvptsagvpeavarltlvtpyndvealer
vfaeygdriagvivepvianagvipprreflaalqrlsresgallildevvtgfrlgleg
aqgyfniegdiivlgkiigggfpvgavagsrevmslltpqgkvfnagtfnahpitmaagl
atlkaleeepvysvsreaakaleeaasevldrtglpytinrvesmmqlfigveevsnaaq
arkadkkfyvklheemlrrgvfiapsnleavftglphqgealeiaveglrsslktvlgs

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2zsmC (C:)
ghmdvlasgeksrmlfertkelfpggvnspvraavkpypfyvkrgegaylytvdgarivd
lvlaygplilghkhprvleaveealargwlygapgeaevllaekilgyvkrggmirfvns
gteatmtairlargytgrdlilkfdgcyhgshdavlvaagsaaahygvptsagvpeavar
ltlvtpyndvealervfaeygdriagvivepvianagvipprreflaalqrlsresgall
ildevvtgfrlglegaqgyfniegdiivlgkiigggfpvgavagsrevmslltpqgkvfn
agtfnahpitmaaglatlkaleeepvysvsreaakaleeaasevldrtglpytinrvesm
mqlfigveevsnaaqarkadkkfyvklheemlrrgvfiapsnleavftglphqgealeia
veglrsslktvlgs

    Sequence, based on observed residues (ATOM records): (download) 
    >2zsmC (C:)
eksrmlfertkelfpggvnspvraavkpypfyvkrgegaylytvdgarivdlvlaygpli
lghkhprvleaveealargwlygapgeaevllaekilgyvkrggmirfvnsgteatmtai
rlargytgrdlilkfdgcyhgshdavlvaaggvptsagvpeavarltlvtpyndvealer
vfaeygdriagvivepvianagvipprreflaalqrlsresgallildevvtgfrlgleg
aqgyfniegdiivlgkiigggfpvgavagsrevmslltpqgkvfnagtfnahpitmaagl
atlkaleeepvysvsreaakaleeaasevldrtglpytinrvesmmqlfigveevsnaaq
arkadkkfyvklheemlrrgvfiapsnleavftglphqgealeiaveglrsslktvlgs