PDB entry 2zpx
View 2zpx on RCSB PDB site
Description: TNF Receptor Subtype One-selective TNF Mutant with Antagonistic Activity; R1antTNF-T8
Class: cytokine
Keywords: Tumor necrosis factor, Trimer, Antagonistic activity, TNFR1 specific, Phage display system, Cytokine, Cell membrane, Lipoprotein, Membrane, Myristate, Phosphoprotein, Polymorphism, Secreted, Signal-anchor, Transmembrane
Deposited on
2008-07-29, released
2009-03-24
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-08-18, with a file datestamp of
2009-08-14.
Experiment type: XRAY
Resolution: 2.83 Å
R-factor: 0.268
AEROSPACI score: 0.19
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Tumor necrosis factor
Species: Homo sapiens [TaxId:9606]
Gene: TNF, TNFA, TNFSF2
Database cross-references and differences (RAF-indexed):
- Uniprot P01375 (Start-156)
- engineered (10)
- engineered (64)
- engineered (83-89)
- engineered (97)
- engineered (111)
- engineered (127)
Domains in SCOPe 2.05: d2zpxa_ - Chain 'B':
Compound: Tumor necrosis factor
Species: Homo sapiens [TaxId:9606]
Gene: TNF, TNFA, TNFSF2
Database cross-references and differences (RAF-indexed):
- Uniprot P01375 (Start-156)
- engineered (10)
- engineered (64)
- engineered (83-89)
- engineered (97)
- engineered (111)
- engineered (127)
Domains in SCOPe 2.05: d2zpxb_ - Chain 'C':
Compound: Tumor necrosis factor
Species: Homo sapiens [TaxId:9606]
Gene: TNF, TNFA, TNFSF2
Database cross-references and differences (RAF-indexed):
- Uniprot P01375 (Start-156)
- engineered (10)
- engineered (64)
- engineered (83-89)
- engineered (97)
- engineered (111)
- engineered (127)
Domains in SCOPe 2.05: d2zpxc_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2zpxA (A:)
vrsssrtpsdmpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliys
qvlfsgqgcpsthvllthtisritpainrpvnllsairspcqretpegaeanpwyepiyl
ggvfqlepgdrlsaeinrpdyldfaesgqvyfgiial
Sequence, based on observed residues (ATOM records): (download)
>2zpxA (A:)
psdmpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfsgq
gcpsthvllthtisritpainrpvnllsairspcqanpwyepiylggvfqlepgdrlsae
inrpdyldfaesgqvyfgiial
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2zpxB (B:)
vrsssrtpsdmpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliys
qvlfsgqgcpsthvllthtisritpainrpvnllsairspcqretpegaeanpwyepiyl
ggvfqlepgdrlsaeinrpdyldfaesgqvyfgiial
Sequence, based on observed residues (ATOM records): (download)
>2zpxB (B:)
psdmpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfsgq
gcpsthvllthtisritpainrpvnllsairspcqanpwyepiylggvfqlepgdrlsae
inrpdyldfaesgqvyfgiial
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2zpxC (C:)
vrsssrtpsdmpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliys
qvlfsgqgcpsthvllthtisritpainrpvnllsairspcqretpegaeanpwyepiyl
ggvfqlepgdrlsaeinrpdyldfaesgqvyfgiial
Sequence, based on observed residues (ATOM records): (download)
>2zpxC (C:)
psdmpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfsgq
gcpsthvllthtisritpainrpvnllsairspcqanpwyepiylggvfqlepgdrlsae
inrpdyldfaesgqvyfgiial