SCOP 1.75: Structural Classification of Proteins

PDB entry 2zle

View 2zle on RCSB PDB site
Description: Cryo-EM structure of DegP12/OMP
Class: hydrolase
Keywords: DegP, HtrA, protease, chaperone, PDZ, outer membrane protein, OMP, periplasm, Hydrolase, Serine protease, Stress response, Ion transport, Phage recognition, Porin, Transmembrane, Transport
Deposited on 2008-04-09, released 2008-06-03
The last revision prior to the SCOP 1.75 freeze date was dated 2008-08-12, with a file datestamp of 2008-08-08.
Experiment type: EM
Resolution: 28 Å
R-factor: N/A
AEROSPACI score: -0.14 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Protease do
Species: Escherichia coli [TaxId:562]
Gene: degP, htrA, ptd
Database cross-references and differences (RAF-indexed):
- Uniprot P0C0V0
Domains in SCOP 1.75: d2zlea1, d2zlea2, d2zlea3
Chain 'B':
Compound: Protease do
Species: Escherichia coli [TaxId:562]
Gene: degP, htrA, ptd
Database cross-references and differences (RAF-indexed):
- Uniprot P0C0V0
Domains in SCOP 1.75: d2zleb1, d2zleb2, d2zleb3
Chain 'C':
Compound: Protease do
Species: Escherichia coli [TaxId:562]
Gene: degP, htrA, ptd
Database cross-references and differences (RAF-indexed):
- Uniprot P0C0V0
Domains in SCOP 1.75: d2zlec1, d2zlec2, d2zlec3
Chain 'D':
Compound: Outer membrane protein C
Species: Escherichia coli [TaxId:562]
Gene: ompC, meoA, par
Database cross-references and differences (RAF-indexed):
- Uniprot P06996 (0-345)
Chain 'E':
Compound: Protease do
Species: Escherichia coli [TaxId:562]
Gene: degP, htrA, ptd
Database cross-references and differences (RAF-indexed):
- Uniprot P0C0V0
Domains in SCOP 1.75: d2zlee1, d2zlee2, d2zlee3
Chain 'F':
Compound: Protease do
Species: Escherichia coli [TaxId:562]
Gene: degP, htrA, ptd
Database cross-references and differences (RAF-indexed):
- Uniprot P0C0V0
Domains in SCOP 1.75: d2zlef1, d2zlef2, d2zlef3
Chain 'G':
Compound: Protease do
Species: Escherichia coli [TaxId:562]
Gene: degP, htrA, ptd
Database cross-references and differences (RAF-indexed):
- Uniprot P0C0V0
Domains in SCOP 1.75: d2zleg1, d2zleg2, d2zleg3
Chain 'H':
Compound: Protease do
Species: Escherichia coli [TaxId:562]
Gene: degP, htrA, ptd
Database cross-references and differences (RAF-indexed):
- Uniprot P0C0V0
Domains in SCOP 1.75: d2zleh1, d2zleh2, d2zleh3
Chain 'I':
Compound: Protease do
Species: Escherichia coli [TaxId:562]
Gene: degP, htrA, ptd
Database cross-references and differences (RAF-indexed):
- Uniprot P0C0V0
Domains in SCOP 1.75: d2zlei1, d2zlei2, d2zlei3
Chain 'J':
Compound: Protease do
Species: Escherichia coli [TaxId:562]
Gene: degP, htrA, ptd
Database cross-references and differences (RAF-indexed):
- Uniprot P0C0V0
Domains in SCOP 1.75: d2zlej1, d2zlej2, d2zlej3
Chain 'K':
Compound: Protease do
Species: Escherichia coli [TaxId:562]
Gene: degP, htrA, ptd
Database cross-references and differences (RAF-indexed):
- Uniprot P0C0V0
Domains in SCOP 1.75: d2zlek1, d2zlek2, d2zlek3
Chain 'L':
Compound: Protease do
Species: Escherichia coli [TaxId:562]
Gene: degP, htrA, ptd
Database cross-references and differences (RAF-indexed):
- Uniprot P0C0V0 (436-End)
Domains in SCOP 1.75: d2zlel1, d2zlel2, d2zlel3
Chain 'M':
Compound: Protease do
Species: Escherichia coli [TaxId:562]
Gene: degP, htrA, ptd
Database cross-references and differences (RAF-indexed):
- Uniprot P0C0V0
Domains in SCOP 1.75: d2zlem1, d2zlem2, d2zlem3

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2zleA (A:)
aetssattaqqmpslapmlekvmpsvvsinvegsttvntprmprnfqqffgddspfcqeg
spfqsspfcqggqggngggqqqkfmalgsgviidadkgyvvtnnhvvdnatvikvqlsdg
rkfdakmvgkdprsdialiqiqnpknltaikmadsdalrvgdytvaignpfglgetvtsg
ivsalgrsglnaenyenfiqtdaainrgnsggalvnlngeligintailapdggnigigf
aipsnmvknltsqmveygqvkrgelgimgtelnselakamkvdaqrgafvsqvlpnssaa
kagikagdvitslngkpissfaalraqvgtmpvgskltlgllrdgkqvnvnlelqqssqn
qvdsssifngiegaemsnkgkdqgvvvnnvktgtpaaqiglkkgdviiganqqavkniae
lrkvldskpsvlalniqrgdstiyllmq