PDB entry 2zko

View 2zko on RCSB PDB site
Description: Structural basis for dsRNA recognition by NS1 protein of human influenza virus A
Class: RNA binding protein/RNA
Keywords: dsRNA, protein-RNA interaction, Host-virus interaction, Interferon antiviral system evasion, Nucleus, RNA-binding, Suppressor of RNA silencing, RNA BINDING PROTEIN-RNA COMPLEX
Deposited on 2008-03-26, released 2008-10-14
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-01-22, with a file datestamp of 2014-01-17.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.191
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Non-structural protein 1
    Species: Influenza A virus [TaxId:11320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2zkoa_
  • Chain 'B':
    Compound: Non-structural protein 1
    Species: Influenza A virus [TaxId:11320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2zkob_
  • Chain 'C':
    Compound: RNA (5'-r(p*ap*gp*ap*cp*ap*gp*cp*ap*up*up*ap*up*gp*cp*up*gp*up*cp*up*up*u)-3')
  • Chain 'D':
    Compound: RNA (5'-r(p*ap*gp*ap*cp*ap*gp*cp*ap*up*up*ap*up*gp*cp*up*gp*up*cp*up*up*u)-3')
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2zkoA (A:)
gshmdpntvssfqvdcflwhvrkrvadqelgdapfldrlrrdqkslrgrgstlgldieta
tragkqiverilk

    Sequence, based on observed residues (ATOM records): (download) 
    >2zkoA (A:)
mdpntvssfqvdcflwhvrkrvadqelgdapfldrlrrdqkslrgrgstlgldietatra
gkqiverilk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2zkoB (B:)
gshmdpntvssfqvdcflwhvrkrvadqelgdapfldrlrrdqkslrgrgstlgldieta
tragkqiverilk

    Sequence, based on observed residues (ATOM records): (download) 
    >2zkoB (B:)
mdpntvssfqvdcflwhvrkrvadqelgdapfldrlrrdqkslrgrgstlgldietatra
gkqiverilk

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.