PDB entry 2zjv

View 2zjv on RCSB PDB site
Description: Crystal Structure of Lymnaea stagnalis Acetylcholine Binding Protein (Ls-AChBP) Complexed with Clothianidin
Class: signaling protein
Keywords: acetylcholine binding protein, neonicotinoids, nicotinic acetylcholine receptor, clothianidin, Cell junction, Glycoprotein, Immunoglobulin domain, Secreted, Synapse, SIGNALING PROTEIN
Deposited on 2008-03-10, released 2008-04-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.202
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: acetylcholine-binding protein
    Species: Lymnaea stagnalis
    Database cross-references and differences (RAF-indexed):
    • Uniprot P58154
      • engineered (3-4)
      • engineered (69)
    Domains in SCOPe 2.08: d2zjva1, d2zjva2
  • Chain 'B':
    Compound: acetylcholine-binding protein
    Species: Lymnaea stagnalis
    Database cross-references and differences (RAF-indexed):
    • Uniprot P58154
      • engineered (4)
      • engineered (69)
    Domains in SCOPe 2.08: d2zjvb1, d2zjvb2
  • Chain 'C':
    Compound: acetylcholine-binding protein
    Species: Lymnaea stagnalis
    Database cross-references and differences (RAF-indexed):
    • Uniprot P58154
      • engineered (4)
      • engineered (69)
    Domains in SCOPe 2.08: d2zjvc1, d2zjvc2
  • Chain 'D':
    Compound: acetylcholine-binding protein
    Species: Lymnaea stagnalis
    Database cross-references and differences (RAF-indexed):
    • Uniprot P58154
      • engineered (3-4)
      • engineered (69)
    Domains in SCOPe 2.08: d2zjvd1, d2zjvd2
  • Chain 'E':
    Compound: acetylcholine-binding protein
    Species: Lymnaea stagnalis
    Database cross-references and differences (RAF-indexed):
    • Uniprot P58154
      • engineered (3-4)
      • engineered (69)
    Domains in SCOPe 2.08: d2zjve1, d2zjve2
  • Heterogens: CT4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2zjvA (A:)
eaeaadradilynirqtsrpdviptqrdrpvavsvslkfinilevneitnevdvvfwqqt
twsdrtlawdsshspdqvsvpisslwvpdlaaynaiskpevltpqlarvvsdgevlymps
irqrfscdvsgvdtesgatcrikigswthhsreisvdpttensddseyfsqysrfeildv
tqkknsvtysccpeayedvevslnfrkkgrseil

    Sequence, based on observed residues (ATOM records): (download) 
    >2zjvA (A:)
aadradilynirqtsrpdviptqrdrpvavsvslkfinilevneitnevdvvfwqqttws
drtlawdsshspdqvsvpisslwvpdlaaynaiskpevltpqlarvvsdgevlympsirq
rfscdvsgvdtesgatcrikigswthhsreisvdpttensddseyfsqysrfeildvtqk
knsvtysccpeayedvevslnfrkkgrs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2zjvB (B:)
eaeaadradilynirqtsrpdviptqrdrpvavsvslkfinilevneitnevdvvfwqqt
twsdrtlawdsshspdqvsvpisslwvpdlaaynaiskpevltpqlarvvsdgevlymps
irqrfscdvsgvdtesgatcrikigswthhsreisvdpttensddseyfsqysrfeildv
tqkknsvtysccpeayedvevslnfrkkgrseil

    Sequence, based on observed residues (ATOM records): (download) 
    >2zjvB (B:)
adradilynirqtsrpdviptqrdrpvavsvslkfinilevneitnevdvvfwqqttwsd
rtlawdsshspdqvsvpisslwvpdlaaynaiskpevltpqlarvvsdgevlympsirqr
fscdvsgvdtesgatcrikigswthhsreisvdpttensddseyfsqysrfeildvtqkk
nsvtysccpeayedvevslnfrkkgrse

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2zjvC (C:)
eaeaadradilynirqtsrpdviptqrdrpvavsvslkfinilevneitnevdvvfwqqt
twsdrtlawdsshspdqvsvpisslwvpdlaaynaiskpevltpqlarvvsdgevlymps
irqrfscdvsgvdtesgatcrikigswthhsreisvdpttensddseyfsqysrfeildv
tqkknsvtysccpeayedvevslnfrkkgrseil

    Sequence, based on observed residues (ATOM records): (download) 
    >2zjvC (C:)
adradilynirqtsrpdviptqrdrpvavsvslkfinilevneitnevdvvfwqqttwsd
rtlawdsshspdqvsvpisslwvpdlaaynaiskpevltpqlarvvsdgevlympsirqr
fscdvsgvdtesgatcrikigswthhsreisvdpttensddseyfsqysrfeildvtqkk
nsvtysccpeayedvevslnfrkkgrs

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2zjvD (D:)
eaeaadradilynirqtsrpdviptqrdrpvavsvslkfinilevneitnevdvvfwqqt
twsdrtlawdsshspdqvsvpisslwvpdlaaynaiskpevltpqlarvvsdgevlymps
irqrfscdvsgvdtesgatcrikigswthhsreisvdpttensddseyfsqysrfeildv
tqkknsvtysccpeayedvevslnfrkkgrseil

    Sequence, based on observed residues (ATOM records): (download) 
    >2zjvD (D:)
aadradilynirqtsrpdviptqrdrpvavsvslkfinilevneitnevdvvfwqqttws
drtlawdsshspdqvsvpisslwvpdlaaynaiskpevltpqlarvvsdgevlympsirq
rfscdvsgvdtesgatcrikigswthhsreisvdpttensddseyfsqysrfeildvtqk
knsvtysccpeayedvevslnfrkkgrs

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2zjvE (E:)
eaeaadradilynirqtsrpdviptqrdrpvavsvslkfinilevneitnevdvvfwqqt
twsdrtlawdsshspdqvsvpisslwvpdlaaynaiskpevltpqlarvvsdgevlymps
irqrfscdvsgvdtesgatcrikigswthhsreisvdpttensddseyfsqysrfeildv
tqkknsvtysccpeayedvevslnfrkkgrseil

    Sequence, based on observed residues (ATOM records): (download) 
    >2zjvE (E:)
aadradilynirqtsrpdviptqrdrpvavsvslkfinilevneitnevdvvfwqqttws
drtlawdsshspdqvsvpisslwvpdlaaynaiskpevltpqlarvvsdgevlympsirq
rfscdvsgvdtesgatcrikigswthhsreisvdpttensddseyfsqysrfeildvtqk
knsvtysccpeayedvevslnfrkkgrs