PDB entry 2zjd
View 2zjd on RCSB PDB site
Description: Crystal Structure of LC3-p62 complex
Class: Apoptosis inhibitor/Apoptosis
Keywords: p62, autophagy, LC3, microtubule-associated protein 1 light chain 3, Cytoplasm, Cytoplasmic vesicle, Lipoprotein, Membrane, Ubl conjugation pathway, Alternative splicing, Apoptosis, Differentiation, Endosome, Immune response, Metal-binding, Nucleus, Phosphoprotein, Zinc, Zinc-finger, Apoptosis inhibitor/Apoptosis COMPLEX
Deposited on
2008-03-05, released
2008-06-03
The last revision prior to the SCOPe 2.01 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 1.56 Å
R-factor: 0.203
AEROSPACI score: 0.59
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Microtubule-associated proteins 1A/1B light chain 3B precursor
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d2zjda_ - Chain 'B':
Compound: undecameric peptide from Sequestosome-1
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Microtubule-associated proteins 1A/1B light chain 3B precursor
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d2zjdc_ - Chain 'D':
Compound: undecameric peptide from Sequestosome-1
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2zjdA (A:)
gplgsmpsektfkqrrtfeqrvedvrlireqhptkipviierykgekqlpvldktkflvp
dhvnmselikiirrrlqlnanqaffllvnghsmvsvstpisevyesekdedgflymvyas
qetfgmklsv
Sequence, based on observed residues (ATOM records): (download)
>2zjdA (A:)
psektfkqrrtfeqrvedvrlireqhptkipviierykgekqlpvldktkflvpdhvnms
elikiirrrlqlnanqaffllvnghsmvsvstpisevyesekdedgflymvyasqetfgm
k
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2zjdC (C:)
gplgsmpsektfkqrrtfeqrvedvrlireqhptkipviierykgekqlpvldktkflvp
dhvnmselikiirrrlqlnanqaffllvnghsmvsvstpisevyesekdedgflymvyas
qetfgmklsv
Sequence, based on observed residues (ATOM records): (download)
>2zjdC (C:)
mpsektfkqrrtfeqrvedvrlireqhptkipviierykgekqlpvldktkflvpdhvnm
selikiirrrlqlnanqaffllvnghsmvsvstpisevyesekdedgflymvyasqetfg
mk
- Chain 'D':
No sequence available.