PDB entry 2zdo

View 2zdo on RCSB PDB site
Description: Crystal structure of IsdG-N7A in complex with hemin
Class: oxidoreductase
Keywords: ruffling, protein-substrate complex, Cytoplasm, Heme, Iron, Metal-binding, Monooxygenase, Oxidoreductase
Deposited on 2007-11-27, released 2008-08-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.2
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Heme-degrading monooxygenase isdG
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: isdG
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7A649 (2-108)
      • expression tag (1)
      • engineered (8)
    Domains in SCOPe 2.08: d2zdoa1, d2zdoa2
  • Chain 'B':
    Compound: Heme-degrading monooxygenase isdG
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: isdG
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7A649 (2-108)
      • expression tag (1)
      • engineered (8)
    Domains in SCOPe 2.08: d2zdob1, d2zdob2
  • Chain 'C':
    Compound: Heme-degrading monooxygenase isdG
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: isdG
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7A649 (2-108)
      • expression tag (1)
      • engineered (8)
    Domains in SCOPe 2.08: d2zdoc1, d2zdoc2
  • Chain 'D':
    Compound: Heme-degrading monooxygenase isdG
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: isdG
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7A649 (2-108)
      • expression tag (0-1)
      • engineered (8)
    Domains in SCOPe 2.08: d2zdod1, d2zdod2
  • Heterogens: HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2zdoA (A:)
stmkfmaearltltkgtakdiierfytrhgietlegfdgmfvtqtleqedfdevkiltvw
kskqaftdwlksdvfkaahkhvrsknedesspiinnkvitydigysymk

    Sequence, based on observed residues (ATOM records): (download) 
    >2zdoA (A:)
tmkfmaearltltkgtakdiierfytrhgietlegfdgmfvtqtleqedfdevkiltvwk
skqaftdwlksdvfkaahkhvrsknedesspiinnkvitydigysymk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2zdoB (B:)
stmkfmaearltltkgtakdiierfytrhgietlegfdgmfvtqtleqedfdevkiltvw
kskqaftdwlksdvfkaahkhvrsknedesspiinnkvitydigysymk

    Sequence, based on observed residues (ATOM records): (download) 
    >2zdoB (B:)
tmkfmaearltltkgtakdiierfytrhgietlegfdgmfvtqtleqedfdevkiltvwk
skqaftdwlksdvfkaahkhvrsknedesspiinnkvitydigysymk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2zdoC (C:)
stmkfmaearltltkgtakdiierfytrhgietlegfdgmfvtqtleqedfdevkiltvw
kskqaftdwlksdvfkaahkhvrsknedesspiinnkvitydigysymk

    Sequence, based on observed residues (ATOM records): (download) 
    >2zdoC (C:)
tmkfmaearltltkgtakdiierfytrhgietlegfdgmfvtqtleqedfdevkiltvwk
skqaftdwlksdvfkaahkhvrsknedesspiinnkvitydigysymk

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2zdoD (D:)
stmkfmaearltltkgtakdiierfytrhgietlegfdgmfvtqtleqedfdevkiltvw
kskqaftdwlksdvfkaahkhvrsknedesspiinnkvitydigysymk