PDB entry 2zcd

View 2zcd on RCSB PDB site
Description: Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with AMPPNP
Deposited on 2007-11-08, released 2008-04-22
The last revision was dated 2013-01-02, with a file datestamp of 2012-12-28.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.189
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pyrrolysyl-tRNA synthetase
    Species: Methanosarcina mazei [TaxId:2209]
    Gene: pylS
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8PWY1 (Start-290)
      • see remark 999 (280)
  • Heterogens: MG, ANP, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2zcdA (A:)
mgsshhhhhhssglvprgshmasapaltksqtdrlevllnpkdeislnsgkpfrelesel
lsrrkkdlqqiyaeerenylgklereitrffvdrgfleikspilipleyiermgidndte
lskqifrvdknfclrpmlapnlynylrkldralpdpikifeigpcyrkesdgkehleeft
mlnfcqmgsgctrenlesiitdflnhlgidfkivgdscmvygdtldvmhgdlelssavvg
pipldrewgidkpwigagfglerllkvkhdfknikraarsgsyyngistnl

    Sequence, based on observed residues (ATOM records):
    >2zcdA (A:)
paltksqtdrlevllnpkdesgkpfrelesellsrrkkdlqqiyaeerenylgklereit
rffvdrgfleikspilipleyiermgidndtelskqifrvdknfclrpmlapnlynylrk
ldralpdpikifeigpcyrkesdgkehleeftmlnfcqmgsgctrenlesiitdflnhlg
idfkivgdgdtldvmhgdlelssavvgpipldrewgidkpwigagfglerllkvkhdfkn
ikraarsgsyyngistnl