PDB entry 2z8v

View 2z8v on RCSB PDB site
Description: Structure of an IgNAR-AMA1 complex
Class: immune system
Keywords: AMA1-VNAR complex, 14I-1, Receptor, IMMUNE SYSTEM
Deposited on 2007-09-11, released 2007-11-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: 0.21
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: apical membrane antigen 1
  Species: PLASMODIUM FALCIPARUM [TaxId:36329]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q7KQK5 (0-334)
• Chain 'B':
  Compound: apical membrane antigen 1
  Species: PLASMODIUM FALCIPARUM [TaxId:36329]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q7KQK5 (0-334)
• Chain 'C':
  Compound: new antigen receptor variable domain
  Species: Orectolobus maculatus [TaxId:168098]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q6X1E6 (0-112)
    • engineered (28)
    • engineered (91)
    • expression tag (113-115)
  Domains in SCOPe 2.08: d2z8vc1, d2z8vc2
• Chain 'D':
  Compound: new antigen receptor variable domain
  Species: Orectolobus maculatus [TaxId:168098]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q6X1E6 (0-112)
    • engineered (28)
    • engineered (91)
    • expression tag (113-115)
  Domains in SCOPe 2.08: d2z8vd1, d2z8vd2
• Heterogens: HOH

PDB Chain Sequences:

• Chain 'A':
  No sequence available.
  
  
• Chain 'B':
  No sequence available.
  
  
• Chain 'C':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2z8vC (C:)
  awvdqtprtatketgesltincvlrdaslelkdtgwyrtklgstneqsisiggryvetvn
  kgsksfslrisdlrvedsgtykcqafyslplrdynysllfrgekgagtaltvkaaa
  

  
  
• Chain 'D':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2z8vD (D:)
  awvdqtprtatketgesltincvlrdaslelkdtgwyrtklgstneqsisiggryvetvn
  kgsksfslrisdlrvedsgtykcqafyslplrdynysllfrgekgagtaltvkaaa