PDB entry 2z8r

View 2z8r on RCSB PDB site
Description: Crystal structure of rhamnogalacturonan lyase YesW at 1.40 A resolution
Deposited on 2007-09-10, released 2007-10-16
The last revision was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: 0.164
AEROSPACI score: 0.61 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: YesW protein
    Species: Bacillus subtilis [TaxId:1423]
    Gene: yesW
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: YesW protein
    Species: Bacillus subtilis [TaxId:1423]
    Gene: yesW
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CA, MPD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2z8rA (A:)
aarqmealnrglvavktdggifvswrflgtenasvlfnvyrdgqklnaapvkttnyvdkn
gsagstytvravvngteqpasekasvwaqpyhsvpldkpaggttpkgesytysandasvg
dvdgdgqyelilkwdpsnskdnsqdgytgdvlidaykldgtklwrinlgkniragahytq
fmvydldgdgkaevamktadgtkdgtgkvignanadyrneqgrvlsgpeyltvfqgstgk
elvtanfepargnvsdwgdsygnrvdrflagiayldgqrpslimtrgyyaktmlvaynfr
dgklsklwtldssksgneafagqgnhnlsiadvdgdgkdeiifgsmavdhdgkgmystgl
ghgdalhtgdldpgrpglevfqvhedknakyglsfrdaatgkilwgvyagkdvgrgmaad
idprypgqevwangslysakgvkigsgvpsstnfgiwwdgdllreqldsnridkwdyqng
vsknmltasgaaanngtkatptlqadllgdwreevvwrtedssalriytttiptehrlyt
lmhdpvyrlgiawqniaynqpphtsfflgdgmaeqpkpnmytplehhhhhh

    Sequence, based on observed residues (ATOM records):
    >2z8rA (A:)
aarqmealnrglvavktdggifvswrflgtenasvlfnvyrdgqklnaapvkttnyvdkn
gsagstytvravvngteqpasekasvwaqpyhsvpldkpaggttpkgesytysandasvg
dvdgdgqyelilkwdpsnskdnsqdgytgdvlidaykldgtklwrinlgkniragahytq
fmvydldgdgkaevamktadgtkdgtgkvignanadyrneqgrvlsgpeyltvfqgstgk
elvtanfepargnvsdwgdsygnrvdrflagiayldgqrpslimtrgyyaktmlvaynfr
dgklsklwtldssksgneafagqgnhnlsiadvdgdgkdeiifgsmavdhdgkgmystgl
ghgdalhtgdldpgrpglevfqvhedknakyglsfrdaatgkilwgvyagkdvgrgmaad
idprypgqevwangslysakgvkigsgvpsstnfgiwwdgdllreqldsnridkwdyqng
vsknmltasgaaanngtkatptlqadllgdwreevvwrtedssalriytttiptehrlyt
lmhdpvyrlgiawqniaynqpphtsfflgdgmaeqpkpnmytp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2z8rB (B:)
aarqmealnrglvavktdggifvswrflgtenasvlfnvyrdgqklnaapvkttnyvdkn
gsagstytvravvngteqpasekasvwaqpyhsvpldkpaggttpkgesytysandasvg
dvdgdgqyelilkwdpsnskdnsqdgytgdvlidaykldgtklwrinlgkniragahytq
fmvydldgdgkaevamktadgtkdgtgkvignanadyrneqgrvlsgpeyltvfqgstgk
elvtanfepargnvsdwgdsygnrvdrflagiayldgqrpslimtrgyyaktmlvaynfr
dgklsklwtldssksgneafagqgnhnlsiadvdgdgkdeiifgsmavdhdgkgmystgl
ghgdalhtgdldpgrpglevfqvhedknakyglsfrdaatgkilwgvyagkdvgrgmaad
idprypgqevwangslysakgvkigsgvpsstnfgiwwdgdllreqldsnridkwdyqng
vsknmltasgaaanngtkatptlqadllgdwreevvwrtedssalriytttiptehrlyt
lmhdpvyrlgiawqniaynqpphtsfflgdgmaeqpkpnmytplehhhhhh

    Sequence, based on observed residues (ATOM records):
    >2z8rB (B:)
aarqmealnrglvavktdggifvswrflgtenasvlfnvyrdgqklnaapvkttnyvdkn
gsagstytvravvngteqpasekasvwaqpyhsvpldkpaggttpkgesytysandasvg
dvdgdgqyelilkwdpsnskdnsqdgytgdvlidaykldgtklwrinlgkniragahytq
fmvydldgdgkaevamktadgtkdgtgkvignanadyrneqgrvlsgpeyltvfqgstgk
elvtanfepargnvsdwgdsygnrvdrflagiayldgqrpslimtrgyyaktmlvaynfr
dgklsklwtldssksgneafagqgnhnlsiadvdgdgkdeiifgsmavdhdgkgmystgl
ghgdalhtgdldpgrpglevfqvhedknakyglsfrdaatgkilwgvyagkdvgrgmaad
idprypgqevwangslysakgvkigsgvpsstnfgiwwdgdllreqldsnridkwdyqng
vsknmltasgaaanngtkatptlqadllgdwreevvwrtedssalriytttiptehrlyt
lmhdpvyrlgiawqniaynqpphtsfflgdgmaeqpkpnmytp