PDB entry 2z2q

View 2z2q on RCSB PDB site
Description: Crystal structure of Flock House Virus
Deposited on 2007-05-25, released 2008-07-15
The last revision was dated 2012-08-01, with a file datestamp of 2012-07-27.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.256
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Coat protein beta
    Species: Flock house virus
    Gene: ALPHA
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Coat protein gamma
    Species: Flock house virus
    Gene: ALPHA
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Coat protein beta
    Species: Flock house virus
    Gene: ALPHA
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Coat protein gamma
    Species: Flock house virus
    Gene: ALPHA
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Coat protein beta
    Species: Flock house virus
    Gene: ALPHA
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Coat protein gamma
    Species: Flock house virus
    Gene: ALPHA
    Database cross-references and differences (RAF-indexed):
  • Chain 'R':
    Compound: RNA (5'-r(*cp*cp*up*cp*up*up*up*up*ap*up*cp*u)-3')
  • Heterogens: CA, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2z2qA (A:)
vnnnrprrqraqrvvvtttqtapvpqqnvprngrrrrnrtrrnrrrvrgmnmaaltrlsq
pglaflkcafappdfntdpgkgipdrfegkvvsrkdvlnqsisftagqdtfiliaptpgv
aywsasvpagtfptsattfnpvnypgftsmfgttstsrsdqvssfryasmnvgiyptsnl
mqfagsitvwkcpvklstvqfpvatdpatsslvhtlvgldgvlavgpdnfsesfikgvfs
qsacnepdfefndilegiqtlppanvslgstgqpftmdsgaeatsgvvgwgnmdtivirv
sapegavnsailkawscieyrpnpnamlyqfghdsppldevalqeyrtvarslpvaviaa
qn

    Sequence, based on observed residues (ATOM records):
    >2z2qA (A:)
qtapvpqqnvptrlsqpglaflkcafappdfntdpgkgipdrfegkvvsrkdvlnqsisf
tagqdtfiliaptpgvaywsasvpagtfptsattfnpvnypgftsmfgttstsrsdqvss
fryasmnvgiyptsnlmqfagsitvwkcpvklstvqfpvatdpatsslvhtlvgldgvla
vgpdnfsesfikgvfsqsacnepdfefndilegiqtlppanvslgstgqpftmdsgaeat
sgvvgwgnmdtivirvsapegavnsailkawscieyrpnpnamlyqfghdsppldevalq
eyrtvarslpvaviaaqn

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2z2qB (B:)
asmwervksiiksslaaasnipgpigvaasgisglsalfegfgf

    Sequence, based on observed residues (ATOM records):
    >2z2qB (B:)
asmwervksiikssl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2z2qC (C:)
vnnnrprrqraqrvvvtttqtapvpqqnvprngrrrrnrtrrnrrrvrgmnmaaltrlsq
pglaflkcafappdfntdpgkgipdrfegkvvsrkdvlnqsisftagqdtfiliaptpgv
aywsasvpagtfptsattfnpvnypgftsmfgttstsrsdqvssfryasmnvgiyptsnl
mqfagsitvwkcpvklstvqfpvatdpatsslvhtlvgldgvlavgpdnfsesfikgvfs
qsacnepdfefndilegiqtlppanvslgstgqpftmdsgaeatsgvvgwgnmdtivirv
sapegavnsailkawscieyrpnpnamlyqfghdsppldevalqeyrtvarslpvaviaa
qn

    Sequence, based on observed residues (ATOM records):
    >2z2qC (C:)
trlsqpglaflkcafappdfntdpgkgipdrfegkvvsrkdvlnqsisftagqdtfilia
ptpgvaywsasvpagtfptsattfnpvnypgftsmfgttstsrsdqvssfryasmnvgiy
ptsnlmqfagsitvwkcpvklstvqfpvatdpatsslvhtlvgldgvlavgpdnfsesfi
kgvfsqsacnepdfefndilegiqtlppanvslgstgqpftmdsgaeatsgvvgwgnmdt
ivirvsapegavnsailkawscieyrpnpnamlyqfghdsppldevalqeyrtvarslpv
aviaaqn

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2z2qD (D:)
asmwervksiiksslaaasnipgpigvaasgisglsalfegfgf

    Sequence, based on observed residues (ATOM records):
    >2z2qD (D:)
smwervksiikss

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2z2qE (E:)
vnnnrprrqraqrvvvtttqtapvpqqnvprngrrrrnrtrrnrrrvrgmnmaaltrlsq
pglaflkcafappdfntdpgkgipdrfegkvvsrkdvlnqsisftagqdtfiliaptpgv
aywsasvpagtfptsattfnpvnypgftsmfgttstsrsdqvssfryasmnvgiyptsnl
mqfagsitvwkcpvklstvqfpvatdpatsslvhtlvgldgvlavgpdnfsesfikgvfs
qsacnepdfefndilegiqtlppanvslgstgqpftmdsgaeatsgvvgwgnmdtivirv
sapegavnsailkawscieyrpnpnamlyqfghdsppldevalqeyrtvarslpvaviaa
qn

    Sequence, based on observed residues (ATOM records):
    >2z2qE (E:)
altrlsqpglaflkcafappdfntdpgkgipdrfegkvvsrkdvlnqsisftagqdtfil
iaptpgvaywsasvpagtfptsattfnpvnypgftsmfgttstsrsdqvssfryasmnvg
iyptsnlmqfagsitvwkcpvklstvqfpvatdpatsslvhtlvgldgvlavgpdnfses
fikgvfsqsacnepdfefndilegiqtlppanvslgstgqpftmdsgaeatsgvvgwgnm
dtivirvsapegavnsailkawscieyrpnpnamlyqfghdsppldevalqeyrtvarsl
pvaviaaqn

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2z2qF (F:)
asmwervksiiksslaaasnipgpigvaasgisglsalfegfgf

    Sequence, based on observed residues (ATOM records):
    >2z2qF (F:)
asmwervksiiksslaaa

  • Chain 'R':
    No sequence available.