PDB entry 2z0a

View 2z0a on RCSB PDB site
Description: Crystal structure of RNA-binding domain of NS1 from influenza A virus A/crow/Kyoto/T1/2004(H5N1)
Class: viral protein
Keywords: avian influenza, H5N1, RNA-binding, NS1, VIRAL PROTEIN, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI
Deposited on 2007-05-07, released 2008-05-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.176
AEROSPACI score: 0.55 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nonstructural protein 1
    Species: Influenza A virus [TaxId:11320]
    Gene: NS1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2z0aa_
  • Chain 'B':
    Compound: nonstructural protein 1
    Species: Influenza A virus [TaxId:11320]
    Gene: NS1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2z0ab_
  • Chain 'C':
    Compound: nonstructural protein 1
    Species: Influenza A virus [TaxId:11320]
    Gene: NS1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5H7I4 (7-End)
      • expression tag (6)
    Domains in SCOPe 2.08: d2z0ac1, d2z0ac2
  • Chain 'D':
    Compound: nonstructural protein 1
    Species: Influenza A virus [TaxId:11320]
    Gene: NS1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2z0ad_
  • Heterogens: GLY, SIN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2z0aA (A:)
    gssgssgmdpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgld
    ietatragkqiverileee
    

    Sequence, based on observed residues (ATOM records): (download)
    >2z0aA (A:)
    mdpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgldietatra
    gkqiverileee
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2z0aB (B:)
    gssgssgmdpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgld
    ietatragkqiverileee
    

    Sequence, based on observed residues (ATOM records): (download)
    >2z0aB (B:)
    dpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgldietatrag
    kqiverileee
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2z0aC (C:)
    gssgssgmdpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgld
    ietatragkqiverileee
    

    Sequence, based on observed residues (ATOM records): (download)
    >2z0aC (C:)
    gmdpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgldietatr
    agkqiverilee
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2z0aD (D:)
    gssgssgmdpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgld
    ietatragkqiverileee
    

    Sequence, based on observed residues (ATOM records): (download)
    >2z0aD (D:)
    mdpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgldietatra
    gkqiverileee