PDB entry 2z0a
View 2z0a on RCSB PDB site
Description: Crystal structure of RNA-binding domain of NS1 from influenza A virus A/crow/Kyoto/T1/2004(H5N1)
Class: viral protein
Keywords: avian influenza, H5N1, RNA-binding, NS1, VIRAL PROTEIN, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI
Deposited on
2007-05-07, released
2008-05-13
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.176
AEROSPACI score: 0.55
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:11320]
Gene: NS1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2z0aa_ - Chain 'B':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:11320]
Gene: NS1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2z0ab_ - Chain 'C':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:11320]
Gene: NS1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2z0ac1, d2z0ac2 - Chain 'D':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:11320]
Gene: NS1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2z0ad_ - Heterogens: GLY, SIN, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2z0aA (A:)
gssgssgmdpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgld
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Sequence, based on observed residues (ATOM records): (download)
>2z0aA (A:)
mdpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgldietatra
gkqiverileee
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2z0aB (B:)
gssgssgmdpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgld
ietatragkqiverileee
Sequence, based on observed residues (ATOM records): (download)
>2z0aB (B:)
dpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgldietatrag
kqiverileee
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2z0aC (C:)
gssgssgmdpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgld
ietatragkqiverileee
Sequence, based on observed residues (ATOM records): (download)
>2z0aC (C:)
gmdpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgldietatr
agkqiverilee
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2z0aD (D:)
gssgssgmdpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgld
ietatragkqiverileee
Sequence, based on observed residues (ATOM records): (download)
>2z0aD (D:)
mdpntvssfqvdcflwhvrkrladqelgdapfldrlrrdqkslrgrgntlgldietatra
gkqiverileee